Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PNY    

Bonds between two atoms of the molecule

Total Number of Bonds: 39


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAA OAE C O sing 1.43 N N
2 CAA CAF C C sing 1.53 N N
3 CAB CAF C C sing 1.53 N N
4 OAC CAO O C doub 1.21 N N
5 OAD CAP O C doub 1.21 N N
6 CAF CAI C C sing 1.53 N N
7 CAF CAQ C C sing 1.53 N N
8 SAG CAH S C sing 1.81 N N
9 CAH CAJ C C sing 1.53 N N
10 CAJ NAM C N sing 1.46 N N
11 CAK CAL C C sing 1.53 N N
12 CAK NAN C N sing 1.47 N N
13 CAL CAO C C sing 1.51 N N
14 NAM CAO N C sing 1.35 N N
15 NAN CAP N C sing 1.35 N N
16 CAP CAQ C C sing 1.51 N N
17 CAQ OAR C O sing 1.43 N N
18 CAA HAA C H sing 1.09 N N
19 CAA HAAA C H sing 1.09 N N
20 CAB HAB C H sing 1.09 N N
21 CAB HABA C H sing 1.09 N N
22 CAB HABB C H sing 1.09 N N
23 OAE HOAE O H sing 0.97 N N
24 SAG HSAG S H sing 1.34 N N
25 CAH HAH C H sing 1.09 N N
26 CAH HAHA C H sing 1.09 N N
27 CAI HAI C H sing 1.09 N N
28 CAI HAIA C H sing 1.09 N N
29 CAI HAIB C H sing 1.09 N N
30 CAJ HAJ C H sing 1.09 N N
31 CAJ HAJA C H sing 1.09 N N
32 CAK HAK C H sing 1.09 N N
33 CAK HAKA C H sing 1.09 N N
34 CAL HAL C H sing 1.09 N N
35 CAL HALA C H sing 1.09 N N
36 NAM HNAM N H sing 0.97 N N
37 NAN HNAN N H sing 0.97 N N
38 CAQ HAQ C H sing 1.09 N N
39 OAR HOAR O H sing 0.97 N N