Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PS1    

Bonds between two atoms of the molecule

Total Number of Bonds: 86


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 P1 O P sing 1.54 N N
2 O2 P1 O P doub 1.55 N N
3 P1 O3 P O sing 1.61 N N
4 P1 O6 P O sing 1.61 N N
5 O3 C1 O C sing 1.43 N N
6 C1 C2 C C sing 1.53 N N
7 C1 H1 C H sing 1.09 N N
8 C1 H2 C H sing 1.09 N N
9 C2 C3 C C sing 1.51 N N
10 C2 N1 C N sing 1.47 N N
11 C2 H3 C H sing 1.09 N N
12 C3 O4 C O doub 1.21 N N
13 C3 O5 C O sing 1.34 N N
14 O5 H4 O H sing 0.97 N N
15 N1 H5 N H sing 1.01 N N
16 N1 H6 N H sing 1.01 N N
17 O6 C4 O C sing 1.43 N N
18 C4 C5 C C sing 1.53 N N
19 C4 H7 C H sing 1.09 N N
20 C4 H8 C H sing 1.09 N N
21 C5 C6 C C sing 1.53 N N
22 C5 O9 C O sing 1.45 N N
23 C5 H9 C H sing 1.09 N N
24 C6 O7 C O sing 1.45 N N
25 C6 H10 C H sing 1.09 N N
26 C6 H11 C H sing 1.09 N N
27 O7 C7 O C sing 1.34 N N
28 C7 O8 C O doub 1.21 N N
29 C7 C8 C C sing 1.51 N N
30 C8 C9 C C sing 1.53 N N
31 C8 H12 C H sing 1.09 N N
32 C8 H13 C H sing 1.09 N N
33 C9 C10 C C sing 1.53 N N
34 C9 H14 C H sing 1.09 N N
35 C9 H15 C H sing 1.09 N N
36 C10 C11 C C sing 1.53 N N
37 C10 H16 C H sing 1.09 N N
38 C10 H17 C H sing 1.09 N N
39 C11 C12 C C sing 1.53 N N
40 C11 H18 C H sing 1.09 N N
41 C11 H19 C H sing 1.09 N N
42 C12 C13 C C sing 1.53 N N
43 C12 H20 C H sing 1.09 N N
44 C12 H21 C H sing 1.09 N N
45 C13 C14 C C sing 1.53 N N
46 C13 H22 C H sing 1.09 N N
47 C13 H23 C H sing 1.09 N N
48 C14 C15 C C sing 1.53 N N
49 C14 H24 C H sing 1.09 N N
50 C14 H25 C H sing 1.09 N N
51 C15 C16 C C sing 1.53 N N
52 C15 H26 C H sing 1.09 N N
53 C15 H27 C H sing 1.09 N N
54 C16 H28 C H sing 1.09 N N
55 C16 H29 C H sing 1.09 N N
56 C16 H30 C H sing 1.09 N N
57 O9 C17 O C sing 1.34 N N
58 C17 O10 C O doub 1.21 N N
59 C17 C18 C C sing 1.51 N N
60 C18 C19 C C sing 1.53 N N
61 C18 H31 C H sing 1.09 N N
62 C18 H32 C H sing 1.09 N N
63 C19 C20 C C sing 1.53 N N
64 C19 H33 C H sing 1.09 N N
65 C19 H34 C H sing 1.09 N N
66 C20 C21 C C sing 1.53 N N
67 C20 H35 C H sing 1.09 N N
68 C20 H36 C H sing 1.09 N N
69 C21 C22 C C sing 1.53 N N
70 C21 H37 C H sing 1.09 N N
71 C21 H38 C H sing 1.09 N N
72 C22 C23 C C sing 1.53 N N
73 C22 H39 C H sing 1.09 N N
74 C22 H40 C H sing 1.09 N N
75 C23 C24 C C sing 1.53 N N
76 C23 H41 C H sing 1.09 N N
77 C23 H42 C H sing 1.09 N N
78 C24 C25 C C sing 1.53 N N
79 C24 H43 C H sing 1.09 N N
80 C24 H44 C H sing 1.09 N N
81 C25 C26 C C sing 1.53 N N
82 C25 H45 C H sing 1.09 N N
83 C25 H46 C H sing 1.09 N N
84 C26 H47 C H sing 1.09 N N
85 C26 H48 C H sing 1.09 N N
86 C26 H49 C H sing 1.09 N N