Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PSZ    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1T C3A O C sing 1.35 N N
2 O1T HO1T O H sing 0.97 N N
3 C3A O2T C O doub 1.22 N N
4 C3A C2T C C sing 1.46 N N
5 C2T C3T C C doub 1.37 N Y
6 C2T S C S sing 1.76 N Y
7 S C5T S C sing 1.71 N Y
8 C5T C4T C C doub 1.34 N Y
9 C5T H5T C H sing 1.08 N N
10 C4T C3T C C sing 1.38 N Y
11 C4T N4A C N sing 1.41 N N
12 C3T H3T C H sing 1.08 N N
13 N4A C4A N C sing 1.47 N N
14 N4A HN4A N H sing 0.97 N N
15 C4A C4 C C sing 1.51 N N
16 C4A H4A1 C H sing 1.09 N N
17 C4A H4A2 C H sing 1.09 N N
18 C4 C3 C C sing 1.39 N Y
19 C4 C5 C C doub 1.39 N Y
20 C3 O3 C O sing 1.36 N N
21 C3 C2 C C doub 1.39 N Y
22 O3 HO3 O H sing 0.97 N N
23 C2 C2A C C sing 1.51 N N
24 C2 N1 C N sing 1.32 N Y
25 C2A H2A1 C H sing 1.09 N N
26 C2A H2A2 C H sing 1.09 N N
27 C2A H2A3 C H sing 1.09 N N
28 N1 C6 N C doub 1.32 N Y
29 C6 C5 C C sing 1.38 N Y
30 C6 H6 C H sing 1.08 N N
31 C5 C5A C C sing 1.51 N N
32 C5A O4P C O sing 1.43 N N
33 C5A H5A1 C H sing 1.09 N N
34 C5A H5A2 C H sing 1.09 N N
35 O4P P O P sing 1.61 N N
36 P O2P P O doub 1.48 N N
37 P O3P P O sing 1.61 N N
38 P O1P P O sing 1.61 N N
39 O3P HO3P O H sing 0.97 N N
40 O1P HO1P O H sing 0.97 N N