Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PT0    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CA N C N sing 1.47 N N
2 N HN N H sing 1.01 N N
3 N HNA N H sing 1.01 N N
4 C5 O C O doub 1.21 N N
5 O1P P O P doub 1.48 N N
6 CA P C P sing 1.82 N N
7 O2P P O P sing 1.61 N N
8 P CP P C sing 1.82 N N
9 CP C5 C C sing 1.51 N N
10 C5 O6 C O sing 1.34 N N
11 O6 C6 O C sing 1.45 N N
12 C7 C6 C C sing 1.53 N N
13 C6 H6 C H sing 1.09 N N
14 C6 H6A C H sing 1.09 N N
15 C7 H7 C H sing 1.09 N N
16 C7 H7A C H sing 1.09 N N
17 C7 H7B C H sing 1.09 N N
18 CB CA C C sing 1.53 N N
19 CA HA C H sing 1.09 N N
20 CG CB C C sing 1.53 N N
21 CB HB C H sing 1.09 N N
22 CB HBA C H sing 1.09 N N
23 CD1 CG C C sing 1.53 N N
24 CG CD2 C C sing 1.53 N N
25 CG HG C H sing 1.09 N N
26 CP HP C H sing 1.09 N N
27 CP HPA C H sing 1.09 N N
28 O2P HO2P O H sing 0.97 N N
29 CD1 HD1 C H sing 1.09 N N
30 CD1 HD1A C H sing 1.09 N N
31 CD1 HD1B C H sing 1.09 N N
32 CD2 HD2 C H sing 1.09 N N
33 CD2 HD2A C H sing 1.09 N N
34 CD2 HD2B C H sing 1.09 N N