Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PU1    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CL C13 CL C sing 1.74 N N
2 C13 C15 C C doub 1.39 N Y
3 C13 C12 C C sing 1.38 N Y
4 C15 O3 C O sing 1.36 N N
5 C15 C17 C C sing 1.39 N Y
6 O3 C20 O C sing 1.43 N N
7 C20 H201 C H sing 1.09 N N
8 C20 H202 C H sing 1.09 N N
9 C20 H203 C H sing 1.09 N N
10 C17 O2 C O sing 1.36 N N
11 C17 C16 C C doub 1.39 N Y
12 O2 C19 O C sing 1.43 N N
13 C19 H191 C H sing 1.09 N N
14 C19 H192 C H sing 1.09 N N
15 C19 H193 C H sing 1.09 N N
16 C16 O1 C O sing 1.36 N N
17 C16 C14 C C sing 1.39 N Y
18 O1 C18 O C sing 1.43 N N
19 C18 H181 C H sing 1.09 N N
20 C18 H182 C H sing 1.09 N N
21 C18 H183 C H sing 1.09 N N
22 C14 C12 C C doub 1.38 N Y
23 C14 H14 C H sing 1.08 N N
24 C12 C6 C C sing 1.51 N N
25 C6 C5 C C sing 1.51 N N
26 C6 H6C1 C H sing 1.09 N N
27 C6 H6C2 C H sing 1.09 N N
28 C5 N3 C N doub 1.3 N Y
29 C5 N4 C N sing 1.36 N Y
30 N3 C2 N C sing 1.36 N Y
31 C2 C3 C C doub 1.4 N Y
32 C2 C1 C C sing 1.4 N Y
33 C3 N5 C N sing 1.38 N N
34 C3 N2 C N sing 1.33 N Y
35 N5 H5N1 N H sing 0.97 N N
36 N5 H5N2 N H sing 0.97 N N
37 C1 N1 C N doub 1.33 N Y
38 C1 N4 C N sing 1.37 N Y
39 N1 C4 N C sing 1.32 N Y
40 C4 N2 C N doub 1.32 N Y
41 C4 F C F sing 1.35 N N
42 N4 C7 N C sing 1.46 N N
43 C7 C8 C C sing 1.53 N N
44 C7 H7C1 C H sing 1.09 N N
45 C7 H7C2 C H sing 1.09 N N
46 C8 C9 C C sing 1.53 N N
47 C8 H8C1 C H sing 1.09 N N
48 C8 H8C2 C H sing 1.09 N N
49 C9 C10 C C sing 1.47 N N
50 C9 H9C1 C H sing 1.09 N N
51 C9 H9C2 C H sing 1.09 N N
52 C10 C11 C C trip 1.17 N N
53 C11 H11 C H sing 1.05 N N