Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : PZ1    

Bonds between two atoms of the molecule

Total Number of Bonds: 88


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 O1 C O sing 1.43 N N
2 C1 H1C1 C H sing 1.09 N N
3 C1 H1C2 C H sing 1.09 N N
4 C1 H1C3 C H sing 1.09 N N
5 O1 C2 O C sing 1.36 N N
6 C2 C3 C C sing 1.39 N Y
7 C2 C5 C C doub 1.39 N Y
8 C3 C4 C C sing 1.51 N N
9 C3 C8 C C doub 1.38 N Y
10 C4 O2 C O sing 1.43 N N
11 C4 H4C1 C H sing 1.09 N N
12 C4 H4C2 C H sing 1.09 N N
13 O2 C33 O C sing 1.43 N N
14 C5 C6 C C sing 1.38 N Y
15 C5 H5 C H sing 1.08 N N
16 C6 C7 C C doub 1.38 N Y
17 C6 H6 C H sing 1.08 N N
18 C7 C8 C C sing 1.38 N Y
19 C7 H7 C H sing 1.08 N N
20 C8 H8 C H sing 1.08 N N
21 C20 C21 C C sing 1.53 N N
22 C20 N3 C N sing 1.46 N N
23 C20 C24 C C sing 1.53 N N
24 C20 H20 C H sing 1.09 N N
25 C21 N2 C N sing 1.47 N N
26 C21 H211 C H sing 1.09 N N
27 C21 H212 C H sing 1.09 N N
28 N2 C22 N C sing 1.47 N N
29 N2 H2 N H sing 1.01 N N
30 C22 C23 C C sing 1.5 N N
31 C22 H221 C H sing 1.09 N N
32 C22 H222 C H sing 1.09 N N
33 C23 N3 C N sing 1.34 N N
34 C23 O5 C O doub 1.21 N N
35 N3 C26 N C sing 1.4 N N
36 C24 O6 C O sing 1.43 N N
37 C24 H241 C H sing 1.09 N N
38 C24 H242 C H sing 1.09 N N
39 O6 C14 O C sing 1.36 N N
40 C25 C26 C C sing 1.39 N Y
41 C25 C30 C C doub 1.38 N Y
42 C25 H25 C H sing 1.08 N N
43 C26 C27 C C doub 1.39 N Y
44 C27 C28 C C sing 1.38 N Y
45 C27 H27 C H sing 1.08 N N
46 C28 C29 C C doub 1.39 N Y
47 C28 H28 C H sing 1.08 N N
48 C29 C30 C C sing 1.39 N Y
49 C29 O7 C O sing 1.36 N N
50 C30 H30 C H sing 1.08 N N
51 O7 C31 O C sing 1.43 N N
52 C31 C32 C C sing 1.53 N N
53 C31 H311 C H sing 1.09 N N
54 C31 H312 C H sing 1.09 N N
55 C32 C33 C C sing 1.53 N N
56 C32 H321 C H sing 1.09 N N
57 C32 H322 C H sing 1.09 N N
58 C33 H331 C H sing 1.09 N N
59 C33 H332 C H sing 1.09 N N
60 C34 C19 C C sing 1.53 N N
61 C34 O3 C O sing 1.43 N N
62 C34 H341 C H sing 1.09 N N
63 C34 H342 C H sing 1.09 N N
64 C9 C10 C C doub 1.35 N N
65 C9 C14 C C sing 1.46 N N
66 C9 H9 C H sing 1.08 N N
67 C10 C11 C C sing 1.41 N N
68 C10 H10 C H sing 1.08 N N
69 C11 C12 C C sing 1.5 N N
70 C11 C15 C C doub 1.35 N N
71 C12 C13 C C sing 1.49 N N
72 C12 N1 C N sing 1.47 N N
73 C12 H112 C H sing 1.09 N N
74 C13 C14 C C doub 1.34 N N
75 C13 H13 C H sing 1.08 N N
76 C15 C16 C C sing 1.41 N N
77 C15 H15 C H sing 1.08 N N
78 C16 C17 C C doub 1.35 N N
79 C16 H16 C H sing 1.08 N N
80 C17 N1 C N sing 1.39 N N
81 C17 H17 C H sing 1.08 N N
82 N1 C18 N C sing 1.46 N N
83 C18 C19 C C sing 1.53 N N
84 C18 H181 C H sing 1.09 N N
85 C18 H182 C H sing 1.09 N N
86 C19 H191 C H sing 1.09 N N
87 C19 H192 C H sing 1.09 N N
88 O3 H3 O H sing 0.97 N N