Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : QBQ    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O13 C10 O C doub 1.22 N N
2 C10 N3 C N sing 1.35 N N
3 C10 C2 C C sing 1.41 N N
4 N3 C N C sing 1.36 N N
5 N C N C sing 1.37 N N
6 C N1 C N doub 1.31 N N
7 C2 C3 C C sing 1.46 N Y
8 C2 C1 C C doub 1.4 N Y
9 C3 C4 C C doub 1.34 N Y
10 C1 N1 C N sing 1.34 N N
11 C1 N2 C N sing 1.36 N Y
12 C4 N2 C N sing 1.37 N Y
13 N2 C5 N C sing 1.47 N N
14 C5 O C O sing 1.45 N N
15 C5 C9 C C sing 1.54 N N
16 O C6 O C sing 1.44 N N
17 C9 O12 C O sing 1.43 N N
18 C9 C8 C C sing 1.55 N N
19 C6 C7 C C sing 1.53 N N
20 C6 C8 C C sing 1.54 N N
21 C7 O1 C O sing 1.43 N N
22 C8 O11 C O sing 1.43 N N
23 O1 P O P sing 1.61 N N
24 O3 P O P doub 1.48 N N
25 P O4 P O sing 1.61 N N
26 P O2 P O sing 1.61 N N
27 O4 P1 O P sing 1.61 N N
28 O10 P2 O P doub 1.48 N N
29 O5 P1 O P sing 1.61 N N
30 O7 P1 O P sing 1.61 N N
31 O7 P2 O P sing 1.61 N N
32 P1 O6 P O doub 1.48 N N
33 P2 O8 P O sing 1.61 N N
34 P2 O9 P O sing 1.61 N N
35 C4 H7 C H sing 1.08 N N
36 C5 H C H sing 1.09 N N
37 C6 H1 C H sing 1.09 N N
38 C7 H9 C H sing 1.09 N N
39 C7 H8 C H sing 1.09 N N
40 C8 H2 C H sing 1.09 N N
41 C9 H3 C H sing 1.09 N N
42 O5 H11 O H sing 0.97 N N
43 N3 H16 N H sing 0.97 N N
44 O8 H12 O H sing 0.97 N N
45 N H5 N H sing 0.97 N N
46 N H4 N H sing 0.97 N N
47 C3 H6 C H sing 1.08 N N
48 O11 H14 O H sing 0.97 N N
49 O12 H15 O H sing 0.97 N N
50 O2 H10 O H sing 0.97 N N
51 O9 H13 O H sing 0.97 N N