Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : QPJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 30


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O22 P2 O P doub 1.48 N N
2 O32 P2 O P sing 1.61 N N
3 P2 OPP P O sing 1.61 N N
4 OPP C1' O C sing 1.43 N N
5 C3' C2' C C sing 1.53 N N
6 C1' C2' C C sing 1.53 N N
7 C1' C4' C C sing 1.53 N N
8 C4' O4' C O sing 1.43 N N
9 C4' C5' C C sing 1.53 N N
10 C5' O5' C O sing 1.43 N N
11 OP3 P O P doub 1.48 N N
12 O5' P O P sing 1.61 N N
13 P OP2 P O sing 1.61 N N
14 P OP1 P O sing 1.61 N N
15 C2' H1 C H sing 1.09 N N
16 C2' H2 C H sing 1.09 N N
17 C5' H3 C H sing 1.09 N N
18 C5' H4 C H sing 1.09 N N
19 C4' H5 C H sing 1.09 N N
20 O4' H6 O H sing 0.97 N N
21 C1' H7 C H sing 1.09 N N
22 C3' H8 C H sing 1.09 N N
23 C3' H9 C H sing 1.09 N N
24 OP1 H11 O H sing 0.97 N N
25 OP2 H12 O H sing 0.97 N N
26 O32 H13 O H sing 0.97 N N
27 C3' O2 C O sing 1.43 N N
28 P2 O1 P O sing 1.61 N N
29 O2 H10 O H sing 0.97 N N
30 O1 H14 O H sing 0.97 N N