Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : QYJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C02 O01 C O doub 1.21 N N
2 C04 C03 C C sing 1.54 N N
3 C05 C04 C C sing 1.51 N N
4 C06 C05 C C doub 1.39 N Y
5 O07 C06 O C sing 1.36 N N
6 C08 C06 C C sing 1.39 N Y
7 C09 C08 C C doub 1.38 N Y
8 C10 C09 C C sing 1.38 N Y
9 C11 C10 C C doub 1.39 N Y
10 C12 C11 C C sing 1.51 N N
11 N13 C12 N C sing 1.46 N N
12 C14 N13 C N sing 1.35 N N
13 C16 C15 C C doub 1.4 N Y
14 C17 C16 C C sing 1.38 N Y
15 C18 C17 C C doub 1.39 N Y
16 C20 N19 C N sing 1.35 N N
17 C22 N21 C N sing 1.47 N N
18 C23 C22 C C sing 1.53 N N
19 C24 C23 C C sing 1.53 N N
20 N21 C20 N C sing 1.35 N N
21 O25 C20 O C doub 1.22 N N
22 N19 C18 N C sing 1.39 N N
23 C26 C18 C C sing 1.39 N Y
24 C27 C26 C C doub 1.38 N Y
25 C15 C14 C C sing 1.48 N N
26 O28 C14 O C doub 1.22 N N
27 C03 C02 C C sing 1.51 N N
28 O29 C02 O C sing 1.34 N N
29 C03 C12 C C sing 1.54 N N
30 C05 C11 C C sing 1.38 N Y
31 C15 C27 C C sing 1.4 N Y
32 C22 C24 C C sing 1.53 N N
33 C16 H161 C H sing 1.08 N N
34 C17 H171 C H sing 1.08 N N
35 C12 H121 C H sing 1.09 N N
36 C10 H101 C H sing 1.08 N N
37 C03 H031 C H sing 1.09 N N
38 C04 H041 C H sing 1.09 N N
39 C04 H042 C H sing 1.09 N N
40 C08 H081 C H sing 1.08 N N
41 C09 H091 C H sing 1.08 N N
42 C22 H221 C H sing 1.09 N N
43 C23 H231 C H sing 1.09 N N
44 C23 H232 C H sing 1.09 N N
45 C24 H241 C H sing 1.09 N N
46 C24 H242 C H sing 1.09 N N
47 C26 H261 C H sing 1.08 N N
48 C27 H271 C H sing 1.08 N N
49 N13 H131 N H sing 0.97 N N
50 N19 H191 N H sing 0.97 N N
51 N21 H211 N H sing 0.97 N N
52 O07 H071 O H sing 0.97 N N
53 O29 H1 O H sing 0.97 N N