Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : R00    

Bonds between two atoms of the molecule

Total Number of Bonds: 49


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N C1 N C sing 1.47 N N
2 N H1 N H sing 1.01 N N
3 C1 C2 C C sing 1.53 N N
4 C1 C3 C C sing 1.53 N N
5 C1 H C H sing 1.09 N N
6 C2 O1 C O sing 1.43 N N
7 C2 C10 C C sing 1.53 N N
8 C2 H3 C H sing 1.09 N N
9 O1 H4 O H sing 0.97 N N
10 C3 C4 C C sing 1.51 N N
11 C3 H5 C H sing 1.09 N N
12 C3 H6 C H sing 1.09 N N
13 C4 C5 C C doub 1.38 N Y
14 C4 C6 C C sing 1.38 N Y
15 C5 C7 C C sing 1.38 N Y
16 C5 H7 C H sing 1.08 N N
17 C6 C8 C C doub 1.38 N Y
18 C6 H8 C H sing 1.08 N N
19 C7 C9 C C doub 1.38 N Y
20 C7 H9 C H sing 1.08 N N
21 C8 C9 C C sing 1.38 N Y
22 C8 H10 C H sing 1.08 N N
23 C9 H11 C H sing 1.08 N N
24 C10 H12 C H sing 1.09 N N
25 C10 H13 C H sing 1.09 N N
26 C10 N2 C N sing 1.47 N N
27 N2 C11 N C sing 1.47 N N
28 N2 H14 N H sing 1.01 N N
29 C11 C C C sing 1.51 N N
30 C11 C13 C C sing 1.53 N N
31 C11 H15 C H sing 1.09 N N
32 C O C O doub 1.21 N N
33 C OXT C O sing 1.34 N N
34 C13 C14 C C sing 1.51 N N
35 C13 H16 C H sing 1.09 N N
36 C13 H17 C H sing 1.09 N N
37 C14 C15 C C doub 1.38 N Y
38 C14 C16 C C sing 1.38 N Y
39 C15 C17 C C sing 1.38 N Y
40 C15 H18 C H sing 1.08 N N
41 C16 C18 C C doub 1.38 N Y
42 C16 H19 C H sing 1.08 N N
43 C17 C19 C C doub 1.38 N Y
44 C17 H20 C H sing 1.08 N N
45 C18 C19 C C sing 1.38 N Y
46 C18 H21 C H sing 1.08 N N
47 C19 H22 C H sing 1.08 N N
48 OXT HXT O H sing 0.97 N N
49 N H2 N H sing 1.01 N N