Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : R1Y    

Bonds between two atoms of the molecule

Total Number of Bonds: 31


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O12 C11 O C sing 1.43 N N
2 C11 C09 C C sing 1.53 N N
3 C09 O10 C O sing 1.44 N N
4 C09 C08 C C sing 1.54 N N
5 O10 C06 O C sing 1.44 N N
6 N16 C15 N C doub 1.3 N N
7 C08 O13 C O sing 1.43 N N
8 C08 C07 C C sing 1.55 N N
9 C15 C03 C C sing 1.48 N N
10 C15 N17 C N sing 1.38 N N
11 N04 C03 N C doub 1.32 N Y
12 N04 N05 N N sing 1.4 N Y
13 C03 N02 C N sing 1.34 N Y
14 C06 N05 C N sing 1.47 N N
15 C06 C07 C C sing 1.55 N N
16 N05 C01 N C sing 1.35 N Y
17 N02 C01 N C doub 1.31 N Y
18 C07 O14 C O sing 1.43 N N
19 C01 H1 C H sing 1.08 N N
20 C06 H2 C H sing 1.09 N N
21 C07 H3 C H sing 1.09 N N
22 C08 H4 C H sing 1.09 N N
23 C09 H5 C H sing 1.09 N N
24 C11 H6 C H sing 1.09 N N
25 C11 H7 C H sing 1.09 N N
26 N16 H8 N H sing 0.97 N N
27 N17 H9 N H sing 0.97 N N
28 N17 H10 N H sing 0.97 N N
29 O12 H11 O H sing 0.97 N N
30 O13 H12 O H sing 0.97 N N
31 O14 H13 O H sing 0.97 N N