Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : R6D    

Bonds between two atoms of the molecule

Total Number of Bonds: 63


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N33 C14 N C sing 1.39 N N
2 C14 C15 C C doub 1.39 N Y
3 C14 N13 C N sing 1.33 N Y
4 C15 N16 C N sing 1.32 N Y
5 N13 C12 N C doub 1.33 N Y
6 N16 C17 N C doub 1.32 N Y
7 C12 C17 C C sing 1.39 N Y
8 C12 C02 C C sing 1.48 N N
9 C03 C02 C C doub 1.36 N Y
10 C03 N04 C N sing 1.37 N Y
11 C02 N01 C N sing 1.34 N Y
12 N04 C07 N C sing 1.36 N Y
13 N04 C05 N C sing 1.37 N Y
14 C07 C08 C C doub 1.35 N Y
15 N01 C06 N C doub 1.32 N Y
16 C05 C06 C C sing 1.46 N Y
17 C05 N09 C N doub 1.32 N Y
18 C06 N10 C N sing 1.39 N N
19 C08 N09 C N sing 1.33 N Y
20 C22 C21 C C doub 1.38 N Y
21 C22 C11 C C sing 1.39 N Y
22 C21 C20 C C sing 1.39 N Y
23 N10 C11 N C sing 1.4 N N
24 C11 C18 C C doub 1.39 N Y
25 C20 N23 C N sing 1.4 N N
26 C20 C19 C C doub 1.39 N Y
27 N23 C24 N C sing 1.47 N N
28 N23 C28 N C sing 1.47 N N
29 C18 C19 C C sing 1.38 N Y
30 C25 C24 C C sing 1.53 N N
31 C25 N26 C N sing 1.47 N N
32 C27 C28 C C sing 1.53 N N
33 C27 N26 C N sing 1.47 N N
34 N26 C29 N C sing 1.47 N N
35 C29 C30 C C sing 1.54 N N
36 C29 C32 C C sing 1.54 N N
37 C30 O31 C O sing 1.44 N N
38 C32 O31 C O sing 1.44 N N
39 C03 H1 C H sing 1.08 N N
40 C07 H2 C H sing 1.08 N N
41 C08 H3 C H sing 1.08 N N
42 C15 H4 C H sing 1.08 N N
43 C17 H5 C H sing 1.08 N N
44 C18 H6 C H sing 1.08 N N
45 C19 H7 C H sing 1.08 N N
46 C21 H8 C H sing 1.08 N N
47 C22 H9 C H sing 1.08 N N
48 C24 H10 C H sing 1.09 N N
49 C24 H11 C H sing 1.09 N N
50 C25 H12 C H sing 1.09 N N
51 C25 H13 C H sing 1.09 N N
52 C27 H14 C H sing 1.09 N N
53 C27 H15 C H sing 1.09 N N
54 C28 H16 C H sing 1.09 N N
55 C28 H17 C H sing 1.09 N N
56 C29 H18 C H sing 1.09 N N
57 C30 H19 C H sing 1.09 N N
58 C30 H20 C H sing 1.09 N N
59 C32 H21 C H sing 1.09 N N
60 C32 H22 C H sing 1.09 N N
61 N10 H23 N H sing 0.97 N N
62 N33 H25 N H sing 0.97 N N
63 N33 H26 N H sing 0.97 N N