Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
S98
Bonds between two atoms of the molecule
Total Number of Bonds: 37
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
N2
C3
N
C
sing
1.39
N
Y
2
N2
C1
N
C
sing
1.37
N
Y
3
C3
C12
C
C
doub
1.41
N
Y
4
C3
C4
C
C
sing
1.38
N
Y
5
C12
N13
C
N
sing
1.36
N
Y
6
C12
C11
C
C
sing
1.4
N
Y
7
N13
C1
N
C
doub
1.31
N
Y
8
C1
N14
C
N
sing
1.38
N
N
9
N14
C15
N
C
sing
1.47
N
N
10
C15
C16
C
C
sing
1.51
N
N
11
C16
C121
C
C
doub
1.33
N
Y
12
C16
S1
C
S
sing
1.76
N
Y
13
C11
C10
C
C
doub
1.39
N
Y
14
C10
C5
C
C
sing
1.42
N
Y
15
C10
N9
C
N
sing
1.36
N
N
16
C5
C6
C
C
sing
1.47
N
N
17
C5
C4
C
C
doub
1.39
N
Y
18
C6
O21
C
O
doub
1.22
N
N
19
C6
N7
C
N
sing
1.35
N
N
20
N7
C8
N
C
sing
1.37
N
N
21
C8
N22
C
N
sing
1.37
N
N
22
C8
N9
C
N
doub
1.31
N
N
23
C121
C13
C
C
sing
1.38
N
Y
24
C13
C14
C
C
doub
1.33
N
Y
25
C14
S1
C
S
sing
1.76
N
Y
26
N2
HN2
N
H
sing
0.97
N
N
27
N14
HN14
N
H
sing
0.97
N
N
28
C15
H15
C
H
sing
1.09
N
N
29
C15
H15A
C
H
sing
1.09
N
N
30
C11
H11
C
H
sing
1.08
N
N
31
N7
HN7
N
H
sing
0.97
N
N
32
N22
HN22
N
H
sing
0.97
N
N
33
N22
HN2A
N
H
sing
0.97
N
N
34
C4
H4
C
H
sing
1.08
N
N
35
C121
H111
C
H
sing
1.08
N
N
36
C13
H13
C
H
sing
1.08
N
N
37
C14
H151
C
H
sing
1.08
N
N