Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : SDD    

Bonds between two atoms of the molecule

Total Number of Bonds: 23


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C1 O C sing 1.43 N N
2 O6 C6 O C sing 1.43 N N
3 C1 C2 C C sing 1.51 N N
4 C6 C5 C C sing 1.53 N N
5 C2 C3 C C sing 1.51 N N
6 C2 O2 C O doub 1.21 N N
7 C3 C4 C C sing 1.53 N N
8 C3 O3 C O sing 1.43 N N
9 C4 C5 C C sing 1.53 N N
10 C4 O4 C O sing 1.43 N N
11 C5 O5 C O sing 1.43 N N
12 C1 H11 C H sing 1.09 N N
13 C1 H12 C H sing 1.09 N N
14 O1 HO1 O H sing 0.97 N N
15 C3 H3 C H sing 1.09 N N
16 O3 HO3 O H sing 0.97 N N
17 C4 H4 C H sing 1.09 N N
18 O4 HO4 O H sing 0.97 N N
19 C5 H5 C H sing 1.09 N N
20 O5 HO5 O H sing 0.97 N N
21 C6 H61 C H sing 1.09 N N
22 C6 H62 C H sing 1.09 N N
23 O6 HO6 O H sing 0.97 N N