Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : SKD    

Bonds between two atoms of the molecule

Total Number of Bonds: 38


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.51 N N
2 C1 O1A C O doub 1.21 N N
3 C1 O1B C O sing 1.34 N N
4 C2 C3 C C sing 1.54 N N
5 C2 O6 C O sing 1.44 N N
6 C2 O7 C O sing 1.44 N N
7 C3 C4 C C sing 1.53 N N
8 C3 H31 C H sing 1.09 N N
9 C3 H32 C H sing 1.09 N N
10 C4 C5 C C sing 1.53 N N
11 C4 O4 C O sing 1.43 N N
12 C4 H4 C H sing 1.09 N N
13 C5 C6 C C sing 1.54 N N
14 C5 N5 C N sing 1.46 N N
15 C5 H5 C H sing 1.09 N N
16 C6 C7 C C sing 1.55 N N
17 C6 O6 C O sing 1.45 N N
18 C6 H6 C H sing 1.09 N N
19 C7 C8 C C sing 1.53 N N
20 C7 O7 C O sing 1.44 N N
21 C7 H7 C H sing 1.09 N N
22 C8 C9 C C sing 1.53 N N
23 C8 O8 C O sing 1.43 N N
24 C8 H8 C H sing 1.09 N N
25 C9 O9 C O sing 1.43 N N
26 C9 H91 C H sing 1.09 N N
27 C9 H92 C H sing 1.09 N N
28 C10 C11 C C sing 1.51 N N
29 C10 N5 C N sing 1.35 N N
30 C10 O10 C O doub 1.21 N N
31 C11 H111 C H sing 1.09 N N
32 C11 H112 C H sing 1.09 N N
33 C11 H113 C H sing 1.09 N N
34 N5 HN5 N H sing 0.97 N N
35 O1B HOB1 O H sing 0.97 N N
36 O4 HO4 O H sing 0.97 N N
37 O8 HO8 O H sing 0.97 N N
38 O9 HO9 O H sing 0.97 N N