Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : SLJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 47


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N2 N3 N N sing 1.28 N Y
2 N2 C13 N C doub 1.32 N Y
3 N3 C14 N C sing 1.37 N Y
4 C13 C16 C C sing 1.41 N Y
5 C13 C12 C C sing 1.47 N Y
6 C16 C17 C C doub 1.36 N Y
7 O1 C15 O C doub 1.22 N N
8 C14 C12 C C doub 1.4 N Y
9 C14 C15 C C sing 1.42 N N
10 C12 C11 C C sing 1.4 N Y
11 C15 O2 C O sing 1.35 N N
12 C17 C10 C C sing 1.4 N Y
13 C11 C10 C C doub 1.38 N Y
14 C10 N1 C N sing 1.39 N N
15 N1 C9 N C sing 1.47 N N
16 N1 C8 N C sing 1.46 N N
17 C6 C5 C C doub 1.39 N Y
18 C6 C7 C C sing 1.38 N Y
19 C5 C4 C C sing 1.38 N Y
20 C8 C7 C C sing 1.51 N N
21 C7 C3 C C doub 1.39 N Y
22 C4 N C N doub 1.32 N Y
23 C3 N C N sing 1.32 N Y
24 C3 O C O sing 1.36 N N
25 O C2 O C sing 1.43 N N
26 C2 C1 C C sing 1.53 N N
27 C1 C C C sing 1.53 N N
28 C1 H1 C H sing 1.09 N N
29 C1 H2 C H sing 1.09 N N
30 C2 H3 C H sing 1.09 N N
31 C2 H4 C H sing 1.09 N N
32 C8 H5 C H sing 1.09 N N
33 C8 H6 C H sing 1.09 N N
34 C9 H7 C H sing 1.09 N N
35 C9 H8 C H sing 1.09 N N
36 C9 H9 C H sing 1.09 N N
37 C11 H10 C H sing 1.08 N N
38 C16 H11 C H sing 1.08 N N
39 O2 H12 O H sing 0.97 N N
40 N3 H13 N H sing 0.97 N N
41 C17 H14 C H sing 1.08 N N
42 C6 H15 C H sing 1.08 N N
43 C5 H16 C H sing 1.08 N N
44 C4 H17 C H sing 1.08 N N
45 C H18 C H sing 1.09 N N
46 C H19 C H sing 1.09 N N
47 C H20 C H sing 1.09 N N