Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : T7Y    

Bonds between two atoms of the molecule

Total Number of Bonds: 31


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C C C sing 1.51 N N
2 C1 O C O doub 1.21 N N
3 N C1 N C sing 1.35 N N
4 C2 N C N sing 1.4 N N
5 C3 C2 C C doub 1.39 N Y
6 C4 C3 C C sing 1.38 N Y
7 C5 C4 C C doub 1.38 N Y
8 C6 C5 C C sing 1.39 N Y
9 C6 C7 C C doub 1.39 N Y
10 C7 C2 C C sing 1.39 N Y
11 N1 C6 N C sing 1.4 N N
12 C8 N1 C N sing 1.47 N N
13 C9 C8 C C sing 1.55 N N
14 C10 C9 C C sing 1.55 N N
15 C11 C10 C C sing 1.51 N N
16 C11 N1 C N sing 1.34 N N
17 O1 C11 O C doub 1.21 N N
18 C4 H4 C H sing 1.08 N N
19 C5 H5 C H sing 1.08 N N
20 C7 H6 C H sing 1.08 N N
21 C8 H8 C H sing 1.09 N N
22 C8 H7 C H sing 1.09 N N
23 C10 H12 C H sing 1.09 N N
24 C10 H11 C H sing 1.09 N N
25 N H2 N H sing 0.97 N N
26 C H C H sing 1.09 N N
27 C H13 C H sing 1.09 N N
28 C H1 C H sing 1.09 N N
29 C3 H3 C H sing 1.08 N N
30 C9 H10 C H sing 1.09 N N
31 C9 H9 C H sing 1.09 N N