Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : TAE    

Bonds between two atoms of the molecule

Total Number of Bonds: 35


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1' N1 C N sing 1.46 N N
2 C6 N1 C N sing 1.37 N N
3 N1 C2 N C sing 1.35 N N
4 C2 O2 C O doub 1.22 N N
5 C2 N3 C N sing 1.35 N N
6 C4 N3 C N sing 1.35 N N
7 N3 HN3 N H sing 0.97 N N
8 C5 C4 C C sing 1.42 N N
9 C4 O4 C O doub 1.22 N N
10 C6 C5 C C doub 1.35 N N
11 C5M C5 C C sing 1.51 N N
12 C6 H6 C H sing 1.08 N N
13 O3A PA O P sing 1.61 N N
14 O1A PA O P doub 1.48 N N
15 PA O2A P O sing 1.61 N N
16 PA C4' P C sing 1.82 N N
17 O3B PB O P doub 1.48 N N
18 O2B PB O P sing 1.61 N N
19 PB O1B P O sing 1.61 N N
20 PB O3A P O sing 1.61 N N
21 C1' C2' C C sing 1.51 N N
22 C1' H1' C H sing 1.09 N N
23 C1' H1'A C H sing 1.09 N N
24 O1B HO1B O H sing 0.97 N N
25 C3' C2' C C doub 1.31 E N
26 C2' H2' C H sing 1.08 N N
27 O2A HO2A O H sing 0.97 N N
28 O2B HO2B O H sing 0.97 N N
29 C3' C4' C C sing 1.51 N N
30 C3' H3' C H sing 1.08 N N
31 C4' H4' C H sing 1.09 N N
32 C4' H4'A C H sing 1.09 N N
33 C5M H5M C H sing 1.09 N N
34 C5M H5MA C H sing 1.09 N N
35 C5M H5MB C H sing 1.09 N N