Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : TB9    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C1A N C sing 1.39 N Y
2 N1 C2 N C sing 1.35 N Y
3 N1 HN1 N H sing 0.97 N N
4 C1A C3A C C doub 1.4 N Y
5 C1A C10 C C sing 1.39 N Y
6 C2 S2 C S doub 1.71 N N
7 C2 N3 C N sing 1.33 N Y
8 N3 C3A N C sing 1.43 N Y
9 N3 C4 N C sing 1.46 N N
10 C3A C7A C C sing 1.36 N Y
11 C4 C5 C C sing 1.5 N N
12 C4 H41 C H sing 1.09 N N
13 C4 H42 C H sing 1.09 N N
14 C5 N6 C N sing 1.43 N N
15 C5 C11 C C sing 1.53 N N
16 C5 H5 C H sing 1.09 N N
17 N6 C7 N C sing 1.45 N N
18 N6 C12 N C sing 1.47 N N
19 C7 C7A C C sing 1.51 N N
20 C7 H71 C H sing 1.09 N N
21 C7 H72 C H sing 1.09 N N
22 C7A C8 C C doub 1.4 N Y
23 C8 C9 C C sing 1.38 N Y
24 C8 H8 C H sing 1.08 N N
25 CL9 C9 CL C sing 1.74 N N
26 C9 C10 C C doub 1.38 N Y
27 C10 H10 C H sing 1.08 N N
28 C11 H111 C H sing 1.09 N N
29 C11 H112 C H sing 1.09 N N
30 C11 H113 C H sing 1.09 N N
31 C12 C13 C C sing 1.51 N N
32 C12 H121 C H sing 1.09 N N
33 C12 H122 C H sing 1.09 N N
34 C13 C14 C C doub 1.31 N N
35 C13 H13 C H sing 1.08 N N
36 C14 C15 C C sing 1.51 N N
37 C14 C16 C C sing 1.51 N N
38 C15 H151 C H sing 1.09 N N
39 C15 H152 C H sing 1.09 N N
40 C15 H153 C H sing 1.09 N N
41 C16 H161 C H sing 1.09 N N
42 C16 H162 C H sing 1.09 N N
43 C16 H163 C H sing 1.09 N N