Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : TKW    

Bonds between two atoms of the molecule

Total Number of Bonds: 37


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 NAA CAN N C sing 1.38 N N
2 CAN NAK C N doub 1.33 N N
3 CAN CAO C C sing 1.41 N N
4 NAK CAP N C sing 1.33 N N
5 OAF PAV O P doub 1.48 N N
6 OAC CAO O C sing 1.36 N N
7 CAO CAI C C doub 1.36 N N
8 OAB CAP O C doub 1.22 N N
9 CAP NAU C N sing 1.35 N N
10 OAH PAV O P sing 1.61 N N
11 PAV O5' P O sing 1.61 N N
12 PAV OAG P O sing 1.61 N N
13 CAI NAU C N sing 1.37 N N
14 NAU C1' N C sing 1.47 N N
15 C5' O5' C O sing 1.43 N N
16 C5' C4' C C sing 1.53 N N
17 O4' C4' O C sing 1.44 N N
18 O4' C1' O C sing 1.44 N N
19 C4' C3' C C sing 1.54 N N
20 C1' C2' C C sing 1.54 N N
21 C2' C3' C C sing 1.54 N N
22 C2' O2' C O sing 1.43 N N
23 C3' O3' C O sing 1.43 N N
24 OAG H1 O H sing 0.97 N N
25 OAH H2 O H sing 0.97 N N
26 C5' H3 C H sing 1.09 N N
27 C5' H4 C H sing 1.09 N N
28 C4' H5 C H sing 1.09 N N
29 C3' H6 C H sing 1.09 N N
30 O3' H7 O H sing 0.97 N N
31 C2' H8 C H sing 1.09 N N
32 O2' H9 O H sing 0.97 N N
33 C1' H10 C H sing 1.09 N N
34 NAA H11 N H sing 0.97 N N
35 NAA H12 N H sing 0.97 N N
36 OAC H13 O H sing 0.97 N N
37 CAI H14 C H sing 1.08 N N