Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : TVD    

Bonds between two atoms of the molecule

Total Number of Bonds: 36


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O6 C6 O C sing 1.43 N N
2 C6 C5 C C sing 1.53 N N
3 O9 C9 O C doub 1.21 N N
4 C5 O5 C O sing 1.43 N N
5 C5 C4 C C sing 1.53 N N
6 O5 C1 O C sing 1.43 N N
7 C9 C10 C C sing 1.51 N N
8 C9 N1 C N sing 1.35 N N
9 N1 C1 N C sing 1.47 N N
10 C1 C2 C C sing 1.53 N N
11 C4 O4 C O sing 1.43 N N
12 C4 C3 C C sing 1.53 N N
13 C2 C3 C C sing 1.53 N N
14 C2 N2 C N sing 1.47 N N
15 C3 O3 C O sing 1.43 N N
16 N2 C7 N C sing 1.35 N N
17 O7 C7 O C doub 1.21 N N
18 C7 C8 C C sing 1.51 N N
19 C8 H81 C H sing 1.09 N N
20 C8 H82 C H sing 1.09 N N
21 C8 H83 C H sing 1.09 N N
22 N2 HN2 N H sing 0.97 N N
23 C2 H2 C H sing 1.09 N N
24 C1 H1 C H sing 1.09 N N
25 N1 HN1 N H sing 0.97 N N
26 C10 H11 C H sing 1.09 N N
27 C10 H12 C H sing 1.09 N N
28 C10 H13 C H sing 1.09 N N
29 C3 H3 C H sing 1.09 N N
30 O3 HO3 O H sing 0.97 N N
31 C4 H4 C H sing 1.09 N N
32 C5 H5 C H sing 1.09 N N
33 C6 H61 C H sing 1.09 N N
34 C6 H62 C H sing 1.09 N N
35 O6 HO6 O H sing 0.97 N N
36 O4 HO4 O H sing 0.97 N N