Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : TYT    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 N H N H sing 1.01 N N
3 N H2 N H sing 1.01 N N
4 CA C C C sing 1.51 N N
5 CA C3 C C sing 1.53 N N
6 CA HA C H sing 1.09 N N
7 C OXT C O sing 1.34 N N
8 C O C O doub 1.21 N N
9 OXT HXT O H sing 0.97 N N
10 C3 C4 C C sing 1.53 N N
11 C3 H4 C H sing 1.09 N N
12 C3 H5 C H sing 1.09 N N
13 C4 C5 C C sing 1.5 N N
14 C4 C18 C C sing 1.53 N N
15 C4 H6 C H sing 1.09 N N
16 C5 O3 C O doub 1.21 N N
17 C5 C6 C C sing 1.4 N N
18 C6 C7 C C doub 1.36 N N
19 C6 H7 C H sing 1.08 N N
20 C7 O4 C O sing 1.35 N N
21 C7 C8 C C sing 1.48 N N
22 O4 H20 O H sing 0.97 N N
23 C8 N2 C N doub 1.29 E N
24 C8 C18 C C sing 1.51 N N
25 N2 C9 N C sing 1.47 N N
26 C9 C10 C C sing 1.53 N N
27 C9 C11 C C sing 1.53 N N
28 C9 H8 C H sing 1.09 N N
29 C10 C11 C C sing 1.53 N N
30 C10 H9 C H sing 1.09 N N
31 C10 H10 C H sing 1.09 N N
32 C11 C12 C C sing 1.51 N N
33 C11 H11 C H sing 1.09 N N
34 C12 C13 C C doub 1.38 N Y
35 C12 C17 C C sing 1.38 N Y
36 C13 C14 C C sing 1.38 N Y
37 C13 H12 C H sing 1.08 N N
38 C14 C15 C C doub 1.38 N Y
39 C14 H13 C H sing 1.08 N N
40 C15 C16 C C sing 1.38 N Y
41 C15 H14 C H sing 1.08 N N
42 C16 C17 C C doub 1.38 N Y
43 C16 H15 C H sing 1.08 N N
44 C17 H16 C H sing 1.08 N N
45 C18 H17 C H sing 1.09 N N
46 C18 H18 C H sing 1.09 N N