Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : U0G    

Bonds between two atoms of the molecule

Total Number of Bonds: 44


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C20 C21 C C doub 1.38 N Y
2 C20 C19 C C sing 1.38 N Y
3 C21 C22 C C sing 1.39 N Y
4 C19 C18 C C doub 1.38 N Y
5 C22 O23 C O sing 1.36 N N
6 C22 C17 C C doub 1.39 N Y
7 C18 C17 C C sing 1.38 N Y
8 C17 C16 C C sing 1.51 N N
9 C16 N15 C N sing 1.47 N N
10 N15 C14 N C sing 1.47 N N
11 C14 C13 C C sing 1.53 N N
12 C01 O02 C O sing 1.43 N N
13 O02 C03 O C sing 1.36 N N
14 C13 C12 C C sing 1.51 N N
15 C03 C12 C C doub 1.39 N Y
16 C03 C04 C C sing 1.38 N Y
17 C12 C11 C C sing 1.38 N Y
18 C04 C05 C C doub 1.4 N Y
19 C11 C08 C C doub 1.39 N Y
20 C05 C08 C C sing 1.4 N Y
21 C05 C06 C C sing 1.43 N N
22 C08 O09 C O sing 1.36 N N
23 C10 O09 C O sing 1.43 N N
24 C06 N07 C N trip 1.14 N N
25 C10 H1 C H sing 1.09 N N
26 C10 H2 C H sing 1.09 N N
27 C10 H3 C H sing 1.09 N N
28 C13 H4 C H sing 1.09 N N
29 C13 H5 C H sing 1.09 N N
30 C20 H6 C H sing 1.08 N N
31 C21 H7 C H sing 1.08 N N
32 C01 H8 C H sing 1.09 N N
33 C01 H9 C H sing 1.09 N N
34 C01 H10 C H sing 1.09 N N
35 C04 H11 C H sing 1.08 N N
36 C11 H12 C H sing 1.08 N N
37 C14 H13 C H sing 1.09 N N
38 C14 H14 C H sing 1.09 N N
39 C16 H15 C H sing 1.09 N N
40 C16 H16 C H sing 1.09 N N
41 C18 H17 C H sing 1.08 N N
42 C19 H18 C H sing 1.08 N N
43 N15 H19 N H sing 1.01 N N
44 O23 H21 O H sing 0.97 N N