Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : U6T    

Bonds between two atoms of the molecule

Total Number of Bonds: 54


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C4 N5 C N doub 1.32 N Y
2 C4 N3 C N sing 1.32 N Y
3 N5 C9 N C sing 1.33 N Y
4 N3 C6 N C doub 1.33 N Y
5 C17 C16 C C sing 1.53 N N
6 C17 C18 C C sing 1.53 N N
7 C9 N10 C N sing 1.37 N Y
8 C9 C8 C C doub 1.41 N Y
9 C13 C18 C C sing 1.53 N N
10 C13 N10 C N sing 1.47 N N
11 C13 C14 C C sing 1.53 N N
12 C15 C16 C C sing 1.53 N N
13 C15 C14 C C sing 1.53 N N
14 C16 C19 C C sing 1.51 N N
15 C6 C8 C C sing 1.41 N Y
16 C6 N12 C N sing 1.38 N N
17 N10 C11 N C sing 1.36 N Y
18 C8 N7 C N sing 1.35 N Y
19 C19 N21 C N sing 1.35 N N
20 C19 O20 C O doub 1.21 N N
21 C11 N7 C N doub 1.3 N Y
22 N21 C22 N C sing 1.4 N N
23 C27 C22 C C doub 1.39 N Y
24 C27 C26 C C sing 1.38 N Y
25 C22 C23 C C sing 1.39 N Y
26 C26 C25 C C doub 1.38 N Y
27 C23 C24 C C doub 1.38 N Y
28 C25 C24 C C sing 1.38 N Y
29 C25 S1 C S sing 1.76 N N
30 O28 S1 O S doub 1.42 N N
31 S1 O2 S O doub 1.42 N N
32 S1 C29 S C sing 1.81 N N
33 F31 C29 F C sing 1.4 N N
34 C29 F32 C F sing 1.4 N N
35 C29 F30 C F sing 1.4 N N
36 C4 H1 C H sing 1.08 N N
37 C11 H2 C H sing 1.08 N N
38 C13 H3 C H sing 1.09 N N
39 C14 H4 C H sing 1.09 N N
40 C14 H5 C H sing 1.09 N N
41 C24 H6 C H sing 1.08 N N
42 C23 H7 C H sing 1.08 N N
43 C26 H8 C H sing 1.08 N N
44 C27 H9 C H sing 1.08 N N
45 N21 H10 N H sing 0.97 N N
46 C16 H11 C H sing 1.09 N N
47 C15 H12 C H sing 1.09 N N
48 C15 H13 C H sing 1.09 N N
49 C17 H14 C H sing 1.09 N N
50 C17 H15 C H sing 1.09 N N
51 C18 H16 C H sing 1.09 N N
52 C18 H17 C H sing 1.09 N N
53 N12 H18 N H sing 0.97 N N
54 N12 H19 N H sing 0.97 N N