Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : UOJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 84


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C02 C41 C C sing 1.54 N N
2 C02 C01 C C sing 1.54 N N
3 C03 C41 C C sing 1.54 N N
4 C03 C01 C C sing 1.54 N N
5 C01 C23 C C sing 1.53 N N
6 O24 C22 O C doub 1.21 N N
7 C39 C04 C C sing 1.53 N N
8 C23 O25 C O sing 1.45 N N
9 C23 C22 C C sing 1.51 N N
10 O25 C26 O C sing 1.34 N N
11 C22 N21 C N sing 1.36 N N
12 C11 N12 C N sing 1.47 N N
13 C11 C10 C C sing 1.53 N N
14 C30 C04 C C sing 1.5 N N
15 C30 C31 C C doub 1.33 E N
16 C37 C36 C C doub 1.36 N Y
17 C37 C32 C C sing 1.41 N Y
18 C04 C26 C C sing 1.51 N N
19 C04 C40 C C sing 1.53 N N
20 N12 N13 N N sing 1.39 N N
21 N12 C18 N C sing 1.33 N N
22 C36 C35 C C sing 1.4 N Y
23 C26 O27 C O doub 1.21 N N
24 N13 C14 N C sing 1.48 N N
25 O29 C15 O C doub 1.21 N N
26 O20 C18 O C doub 1.21 N N
27 N21 C19 N C sing 1.48 N N
28 C18 C19 C C sing 1.5 N N
29 C10 C09 C C sing 1.53 N N
30 C09 C14 C C sing 1.53 N N
31 C05 C32 C C doub 1.41 N Y
32 C05 C06 C C sing 1.37 N Y
33 C32 C33 C C sing 1.42 N Y
34 C19 C28 C C sing 1.53 N N
35 C35 C31 C C sing 1.48 N N
36 C35 C34 C C doub 1.39 N Y
37 C14 C15 C C sing 1.5 N N
38 C15 N16 C N sing 1.37 N N
39 C06 C07 C C doub 1.39 N Y
40 C33 C34 C C sing 1.4 N Y
41 C33 N08 C N doub 1.34 N Y
42 C07 N08 C N sing 1.31 N Y
43 C07 C17 C C sing 1.51 N N
44 N16 C17 N C sing 1.48 N N
45 C17 C38 C C sing 1.53 N N
46 C01 H1 C H sing 1.09 N N
47 C02 H2 C H sing 1.09 N N
48 C02 H3 C H sing 1.09 N N
49 C03 H4 C H sing 1.09 N N
50 C03 H5 C H sing 1.09 N N
51 C05 H6 C H sing 1.08 N N
52 C06 H7 C H sing 1.08 N N
53 C09 H8 C H sing 1.09 N N
54 C09 H9 C H sing 1.09 N N
55 C10 H10 C H sing 1.09 N N
56 C10 H11 C H sing 1.09 N N
57 C11 H12 C H sing 1.09 N N
58 C11 H13 C H sing 1.09 N N
59 C14 H14 C H sing 1.1 N N
60 C17 H15 C H sing 1.09 N N
61 C19 H16 C H sing 1.09 N N
62 C23 H17 C H sing 1.09 N N
63 C28 H18 C H sing 1.09 N N
64 C28 H19 C H sing 1.09 N N
65 C28 H20 C H sing 1.09 N N
66 C30 H21 C H sing 1.08 N N
67 C31 H22 C H sing 1.07 N N
68 C34 H23 C H sing 1.08 N N
69 C36 H24 C H sing 1.08 N N
70 C37 H25 C H sing 1.08 N N
71 C38 H26 C H sing 1.09 N N
72 C38 H27 C H sing 1.09 N N
73 C38 H28 C H sing 1.09 N N
74 C39 H29 C H sing 1.09 N N
75 C39 H30 C H sing 1.09 N N
76 C39 H31 C H sing 1.09 N N
77 C40 H32 C H sing 1.09 N N
78 C40 H33 C H sing 1.09 N N
79 C40 H34 C H sing 1.09 N N
80 C41 H35 C H sing 1.09 N N
81 C41 H36 C H sing 1.09 N N
82 N13 H37 N H sing 1.01 N N
83 N16 H38 N H sing 0.97 N N
84 N21 H39 N H sing 0.97 N N