Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
V10
(Stereoisomer)
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
V20
Bonds between two atoms of the molecule
Total Number of Bonds: 45
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
O
C
O
C
sing
1.34
N
N
2
C
OXT
C
O
doub
1.21
N
N
3
C
CA
C
C
sing
1.51
N
N
4
CA
N
C
N
sing
1.47
N
N
5
CA
CB
C
C
sing
1.53
N
N
6
CB
CAJ
C
C
sing
1.53
N
N
7
CAJ
CAL
C
C
sing
1.53
N
N
8
CAL
CAT
C
C
sing
1.51
N
N
9
CAT
OAE
C
O
doub
1.21
N
N
10
CAT
NAO
C
N
sing
1.35
N
N
11
NAO
CAW
N
C
sing
1.47
N
N
12
CAW
CAK
C
C
sing
1.53
N
N
13
CAW
CAU
C
C
sing
1.51
N
N
14
CAK
SAI
C
S
sing
1.81
N
N
15
CAU
OAF
C
O
doub
1.21
N
N
16
CAU
OAP
C
O
sing
1.34
N
N
17
OAP
CAX
O
C
sing
1.45
N
N
18
CAX
CAS
C
C
sing
1.51
N
N
19
CAX
CAN
C
C
sing
1.53
N
N
20
CAS
OAD
C
O
sing
1.34
N
N
21
CAS
OAH
C
O
doub
1.21
N
N
22
CAN
SAQ
C
S
sing
1.81
N
N
23
SAQ
CAA
S
C
sing
1.81
N
N
24
O
H
O
H
sing
0.97
N
N
25
CA
HA
C
H
sing
1.09
N
N
26
N
HN1
N
H
sing
1.01
N
N
27
N
HN2
N
H
sing
1.01
N
N
28
CB
HBC1
C
H
sing
1.09
N
N
29
CB
HBC2
C
H
sing
1.09
N
N
30
CAJ
HAJ1
C
H
sing
1.09
N
N
31
CAJ
HAJ2
C
H
sing
1.09
N
N
32
CAL
HAL1
C
H
sing
1.09
N
N
33
CAL
HAL2
C
H
sing
1.09
N
N
34
NAO
HAO
N
H
sing
0.97
N
N
35
CAW
HAW
C
H
sing
1.09
N
N
36
CAK
HAK1
C
H
sing
1.09
N
N
37
CAK
HAK2
C
H
sing
1.09
N
N
38
SAI
HAI
S
H
sing
1.35
N
N
39
CAX
HAX
C
H
sing
1.09
N
N
40
CAN
HAN1
C
H
sing
1.09
N
N
41
CAN
HAN2
C
H
sing
1.09
N
N
42
OAD
HAD
O
H
sing
0.97
N
N
43
CAA
HAA1
C
H
sing
1.09
N
N
44
CAA
HAA2
C
H
sing
1.09
N
N
45
CAA
HAA3
C
H
sing
1.09
N
N