PDBeChem : Chemical Bonds

Molecule : V3L

Bonds between two atoms of the molecule

Record	First Atom	Second Atom	First Element	Second Element	Bond Order Type	Bond Length	Bond Stereochemistry	Is Aromatic
1	N1	C6	N	C	doub	1.33	N	Y
2	N1	C2	N	C	sing	1.32	N	Y
3	C2	N3	C	N	doub	1.32	N	Y
4	C2	H2	C	H	sing	1.08	N	N
5	C4	N3	C	N	sing	1.33	N	Y
6	C5	C4	C	C	doub	1.4	N	Y
7	C4	N9	C	N	sing	1.37	N	Y
8	C6	C5	C	C	sing	1.41	N	Y
9	C5	N7	C	N	sing	1.35	N	Y
10	N6	C6	N	C	sing	1.38	N	N
11	N6	HN6	N	H	sing	0.97	N	N
12	N6	HN6A	N	H	sing	0.97	N	N
13	N7	C8	N	C	doub	1.3	N	Y
14	C8	N9	C	N	sing	1.36	N	Y
15	C8	H8	C	H	sing	1.08	N	N
16	N9	C1'	N	C	sing	1.46	N	N
17	OP1	P	O	P	doub	1.48	N	N
18	P	O5'	P	O	sing	1.61	N	N
19	P	OP3	P	O	sing	1.61	N	N
20	P	OP2	P	O	sing	1.61	N	N
21	O15	PB	O	P	sing	1.61	N	N
22	O2B	PB	O	P	doub	1.48	N	N
23	PB	O3B	P	O	sing	1.61	N	N
24	PB	O1B	P	O	sing	1.61	N	N
25	O2'	C10	O	C	sing	1.43	N	N
26	C10	C12	C	C	sing	1.54	N	N
27	C10	O14	C	O	sing	1.44	N	N
28	C10	H1''	C	H	sing	1.09	N	N
29	O4'	C1'	O	C	sing	1.44	N	N
30	C1'	C2'	C	C	sing	1.55	N	N
31	C1'	H1'	C	H	sing	1.09	N	N
32	OP3	HOP3	O	H	sing	0.97	N	N
33	O1B	HO1B	O	H	sing	0.97	N	N
34	O12	C12	O	C	sing	1.43	N	N
35	C12	C13	C	C	sing	1.55	N	N
36	C12	H2''	C	H	sing	1.09	N	N
37	O12	HO2'	O	H	sing	0.97	N	N
38	C3'	C2'	C	C	sing	1.55	N	N
39	C2'	O2'	C	O	sing	1.43	N	N
40	C2'	H2'	C	H	sing	1.09	N	N
41	O13	C13	O	C	sing	1.43	N	N
42	C13	C14	C	C	sing	1.55	N	N
43	C13	H3''	C	H	sing	1.09	N	N
44	O13	HO13	O	H	sing	0.97	N	N
45	C4'	C3'	C	C	sing	1.54	N	N
46	C3'	O3'	C	O	sing	1.43	N	N
47	C3'	H3'	C	H	sing	1.09	N	N
48	O3'	HO3'	O	H	sing	0.97	N	N
49	OP2	HOP2	O	H	sing	0.97	N	N
50	O3B	HO3B	O	H	sing	0.97	N	N
51	O14	C14	O	C	sing	1.44	N	N
52	C14	C15	C	C	sing	1.53	N	N
53	C14	H4''	C	H	sing	1.09	N	N
54	O4'	C4'	O	C	sing	1.44	N	N
55	C5'	C4'	C	C	sing	1.53	N	N
56	C4'	H4'	C	H	sing	1.09	N	N
57	C15	O15	C	O	sing	1.43	N	N
58	C15	H5''	C	H	sing	1.09	N	N
59	C15	H5AA	C	H	sing	1.09	N	N
60	C5'	O5'	C	O	sing	1.43	N	N
61	C5'	H5'	C	H	sing	1.09	N	N
62	C5'	H5'A	C	H	sing	1.09	N	N

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