Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : V78    

Bonds between two atoms of the molecule

Total Number of Bonds: 110


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAR CAT C C sing 1.38 N Y
2 CAR CBQ C C doub 1.38 N Y
3 CAT CBS C C doub 1.38 N Y
4 CBS CBF C C sing 1.51 N N
5 CBS CAU C C sing 1.38 N Y
6 CBF CCA C C sing 1.53 N N
7 CAU CAS C C doub 1.38 N Y
8 CAS CBQ C C sing 1.38 N Y
9 CBQ CBB C C sing 1.51 N N
10 CBB CAM C C sing 1.51 N N
11 CAM CAL C C doub 1.31 Z N
12 CAL CAZ C C sing 1.51 N N
13 CAZ NBH C N sing 1.48 N N
14 NBH C N C sing 1.36 N N
15 C O C O doub 1.21 N N
16 C CA C C sing 1.51 N N
17 CA CB C C sing 1.53 N N
18 CA N C N sing 1.49 N N
19 CB CG1 C C sing 1.53 N N
20 CB CG2 C C sing 1.53 N N
21 N CBP N C sing 1.37 N N
22 CBP OAJ C O doub 1.21 N N
23 CBP CCA C C sing 1.51 N N
24 CCA OAK C O sing 1.43 N N
25 CCA CBD C C sing 1.53 N N
26 CBD CBA C C sing 1.53 N N
27 CBA CBC C C sing 1.53 N N
28 CBC NBY C N sing 1.47 N N
29 NBY NBK N N sing 1.37 N N
30 NBY CBE N C sing 1.47 N N
31 NBK CBO N C sing 1.35 N N
32 CBO OAI C O doub 1.21 N N
33 CBO CBX C C sing 1.51 N N
34 CBX CBZ C C sing 1.53 N N
35 CBX NBI C N sing 1.46 N N
36 CBZ CAD C C sing 1.53 N N
37 CBZ CAE C C sing 1.53 N N
38 CBZ CAF C C sing 1.53 N N
39 NBI CBM N C sing 1.35 N N
40 CBM OAG C O doub 1.22 N N
41 CBM OBL C O sing 1.35 N N
42 OBL CAA O C sing 1.45 N N
43 CBE CXQ C C sing 1.51 N N
44 CXQ CXV C C sing 1.38 N Y
45 CXQ CXP C C doub 1.38 N Y
46 CXV CXW C C doub 1.38 N Y
47 CXW CXA C C sing 1.38 N Y
48 CXP CXR C C sing 1.38 N Y
49 CXR CXA C C doub 1.38 N Y
50 CXA CXY C C sing 1.51 N N
51 CXY CXZ C C sing 1.52 N N
52 CXY CXG C C sing 1.49 N N
53 CXZ CXT C C sing 1.49 N N
54 CXT SAI C S doub 1.69 N N
55 SAI CXG S C doub 1.69 N N
56 CAR HAR C H sing 1.08 N N
57 CAT HAT C H sing 1.08 N N
58 CBF HBF1 C H sing 1.09 N N
59 CBF HBF2 C H sing 1.09 N N
60 CAU HAU C H sing 1.08 N N
61 CAS HAS C H sing 1.08 N N
62 CBB HBB1 C H sing 1.09 N N
63 CBB HBB2 C H sing 1.09 N N
64 CAM HAM C H sing 1.08 N N
65 CAL HAL C H sing 1.08 N N
66 CAZ HAZ1 C H sing 1.09 N N
67 CAZ HAZ2 C H sing 1.09 N N
68 NBH HBH N H sing 0.97 N N
69 CA HA C H sing 1.09 N N
70 CB HB C H sing 1.09 N N
71 N H N H sing 0.97 N N
72 CG1 HG11 C H sing 1.09 N N
73 CG1 HG12 C H sing 1.09 N N
74 CG1 HG13 C H sing 1.09 N N
75 CG2 HG21 C H sing 1.09 N N
76 CG2 HG22 C H sing 1.09 N N
77 CG2 HG23 C H sing 1.09 N N
78 OAK HAK O H sing 0.97 N N
79 CBD HBD1 C H sing 1.09 N N
80 CBD HBD2 C H sing 1.09 N N
81 CBA HBA1 C H sing 1.09 N N
82 CBA HBA2 C H sing 1.09 N N
83 CBC HBC1 C H sing 1.09 N N
84 CBC HBC2 C H sing 1.09 N N
85 NBK HBK N H sing 0.97 N N
86 CBE HBE1 C H sing 1.09 N N
87 CBE HBE2 C H sing 1.09 N N
88 CBX HBX C H sing 1.09 N N
89 NBI HBI N H sing 0.97 N N
90 CAD HAD1 C H sing 1.09 N N
91 CAD HAD2 C H sing 1.09 N N
92 CAD HAD3 C H sing 1.09 N N
93 CAE HAE1 C H sing 1.09 N N
94 CAE HAE2 C H sing 1.09 N N
95 CAE HAE3 C H sing 1.09 N N
96 CAF HAF1 C H sing 1.09 N N
97 CAF HAF2 C H sing 1.09 N N
98 CAF HAF3 C H sing 1.09 N N
99 CAA HAA1 C H sing 1.09 N N
100 CAA HAA2 C H sing 1.09 N N
101 CAA HAA3 C H sing 1.09 N N
102 CXV HXV C H sing 1.08 N N
103 CXP HXP C H sing 1.08 N N
104 CXW HXW C H sing 1.08 N N
105 CXR HXR C H sing 1.08 N N
106 CXY HXY C H sing 1.09 N N
107 CXZ HXZ1 C H sing 1.09 N N
108 CXZ HXZ2 C H sing 1.09 N N
109 CXG HXG C H sing 1.08 N N
110 CXT HXT C H sing 1.08 N N