Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
V7A
Bonds between two atoms of the molecule
Total Number of Bonds: 67
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
OBI
CAR
O
C
sing
1.34
N
N
2
OBE
CBC
O
C
doub
1.22
N
N
3
CBG
NBF
C
N
sing
1.47
N
N
4
CBC
NBD
C
N
sing
1.35
N
N
5
CBC
CAQ
C
C
sing
1.47
N
N
6
CAR
CAQ
C
C
doub
1.37
N
N
7
CAR
CAO
C
C
sing
1.5
N
N
8
NBF
CAO
N
C
sing
1.47
N
N
9
NBF
CBH
N
C
sing
1.47
N
N
10
CAQ
CAP
C
C
sing
1.46
N
N
11
CAO
CAN
C
C
sing
1.52
N
N
12
CAP
OBB
C
O
doub
1.21
N
N
13
CAP
CAM
C
C
sing
1.52
N
N
14
CAN
CAM
C
C
sing
1.53
N
N
15
CAN
CAK
C
C
sing
1.53
N
N
16
OBA
CAM
O
C
sing
1.43
N
N
17
CAM
CAL
C
C
sing
1.51
N
N
18
CAK
CAJ
C
C
sing
1.53
N
N
19
CAL
OAZ
C
O
sing
1.35
N
N
20
CAL
CAI
C
C
doub
1.34
N
N
21
CAJ
CAI
C
C
sing
1.51
N
N
22
CAJ
CAG
C
C
sing
1.53
N
N
23
CAI
CAH
C
C
sing
1.43
N
N
24
CAG
CAF
C
C
sing
1.51
N
N
25
CAV
OAU
C
O
sing
1.43
N
N
26
OAU
NAT
O
N
sing
1.46
N
N
27
CAH
OAY
C
O
doub
1.22
N
N
28
CAH
CAE
C
C
sing
1.48
N
N
29
CAF
CAE
C
C
doub
1.4
N
Y
30
CAF
CAA
C
C
sing
1.38
N
Y
31
CAW
NAT
C
N
sing
1.47
N
N
32
CAS
NAT
C
N
sing
1.47
N
N
33
CAS
CAA
C
C
sing
1.51
N
N
34
CAE
CAD
C
C
sing
1.4
N
Y
35
CAA
CAB
C
C
doub
1.38
N
Y
36
CAD
OAX
C
O
sing
1.36
N
N
37
CAD
CAC
C
C
doub
1.39
N
Y
38
CAB
CAC
C
C
sing
1.38
N
Y
39
CAB
H1
C
H
sing
1.08
N
N
40
CAC
H2
C
H
sing
1.08
N
N
41
CAG
H3
C
H
sing
1.09
N
N
42
CAG
H4
C
H
sing
1.09
N
N
43
CAJ
H5
C
H
sing
1.09
N
N
44
CAK
H6
C
H
sing
1.09
N
N
45
CAK
H7
C
H
sing
1.09
N
N
46
CAN
H8
C
H
sing
1.09
N
N
47
CAO
H9
C
H
sing
1.09
N
N
48
CAS
H10
C
H
sing
1.09
N
N
49
CAS
H11
C
H
sing
1.09
N
N
50
CAV
H12
C
H
sing
1.09
N
N
51
CAV
H13
C
H
sing
1.09
N
N
52
CAV
H14
C
H
sing
1.09
N
N
53
CAW
H15
C
H
sing
1.09
N
N
54
CAW
H16
C
H
sing
1.09
N
N
55
CAW
H17
C
H
sing
1.09
N
N
56
CBG
H18
C
H
sing
1.09
N
N
57
CBG
H19
C
H
sing
1.09
N
N
58
CBG
H20
C
H
sing
1.09
N
N
59
CBH
H21
C
H
sing
1.09
N
N
60
CBH
H22
C
H
sing
1.09
N
N
61
CBH
H23
C
H
sing
1.09
N
N
62
NBD
H24
N
H
sing
0.97
N
N
63
NBD
H25
N
H
sing
0.97
N
N
64
OAX
H27
O
H
sing
0.97
N
N
65
OAZ
H28
O
H
sing
0.97
N
N
66
OBA
H29
O
H
sing
0.97
N
N
67
OBI
H30
O
H
sing
0.97
N
N