Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : V8H    

Bonds between two atoms of the molecule

Total Number of Bonds: 63


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C5N C6N C C doub N N
2 C5N C4N C C sing N N
3 C6N N1N C N sing N N
4 C4N C3N C C sing N N
5 N1N C1D N C sing N N
6 N1N C2N N C sing N N
7 C1D O4D C O sing N N
8 C1D C2D C C sing N N
9 C3N C2N C C doub N N
10 C3N C7N C C sing N N
11 O4D C4D O C sing N N
12 C7N N7N C N sing N N
13 C7N O7N C O doub N N
14 C4D C5D C C sing N N
15 C4D C3D C C sing N N
16 O2D C2D O C sing N N
17 C2D C3D C C sing N N
18 C5D O5D C O sing N N
19 C3D O3D C O sing N N
20 O5D PN O P sing N N
21 O2N PN O P doub N N
22 PN O1N P O sing N N
23 PN O3 P O sing N N
24 O3 PA O P sing N N
25 O4B C4B O C sing N N
26 O4B C1B O C sing N N
27 O5B C5B O C sing N N
28 O5B PA O P sing N N
29 C4B C5B C C sing N N
30 C4B C3B C C sing N N
31 PA O2A P O doub N N
32 PA O1A P O sing N N
33 O3B C3B O C sing N N
34 C1B O1 C O sing N N
35 C1B C2B C C sing N N
36 C3B C2B C C sing N N
37 C2B O2B C O sing N N
38 N7N H1 N H sing N N
39 N7N H2 N H sing N N
40 C2N H3 C H sing N N
41 C4N H4 C H sing N N
42 C5N H5 C H sing N N
43 C6N H6 C H sing N N
44 C1D H7 C H sing N N
45 C2D H8 C H sing N N
46 O2D H9 O H sing N N
47 C3D H10 C H sing N N
48 O3D H11 O H sing N N
49 C4D H12 C H sing N N
50 C5D H13 C H sing N N
51 C5D H14 C H sing N N
52 O1N H15 O H sing N N
53 O1A H16 O H sing N N
54 C5B H17 C H sing N N
55 C5B H18 C H sing N N
56 C4B H19 C H sing N N
57 C3B H20 C H sing N N
58 O3B H21 O H sing N N
59 C2B H22 C H sing N N
60 O2B H23 O H sing N N
61 C1B H24 C H sing N N
62 O1 H25 O H sing N N
63 C4N H26 C H sing N N