Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : VGU    

Bonds between two atoms of the molecule

Total Number of Bonds: 22


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C C5 C C doub 1.38 N Y
2 C C1 C C sing 1.38 N Y
3 C5 C4 C C sing 1.38 N Y
4 C1 C2 C C doub 1.38 N Y
5 C4 C3 C C doub 1.4 N Y
6 C2 C3 C C sing 1.4 N Y
7 C3 C6 C C sing 1.48 N N
8 C6 O C O doub 1.22 N N
9 C6 N C N sing 1.35 N N
10 N C7 N C doub 1.3 N N
11 C7 C8 C C sing 1.49 N N
12 N1 C8 N C sing 1.35 N N
13 N1 O2 N O sing 1.42 N N
14 C8 O1 C O doub 1.21 N N
15 N1 H1 N H sing 0.97 N N
16 C7 H2 C H sing 1.08 N N
17 C1 H3 C H sing 1.08 N N
18 C5 H4 C H sing 1.08 N N
19 C4 H5 C H sing 1.08 N N
20 C2 H6 C H sing 1.08 N N
21 O2 H7 O H sing 0.97 N N
22 C H8 C H sing 1.08 N N