Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : VO8    

Bonds between two atoms of the molecule

Total Number of Bonds: 63


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C9 C8 C C doub 1.38 N Y
2 C9 C10 C C sing 1.38 N Y
3 C8 C7 C C sing 1.39 N Y
4 C10 C11 C C doub 1.38 N Y
5 C1 C2 C C sing 1.53 N N
6 O2 C4 O C doub 1.22 N N
7 C6 O3 C O sing 1.43 N N
8 C6 C5 C C sing 1.53 N N
9 C7 O3 C O sing 1.36 N N
10 C7 C12 C C doub 1.39 N Y
11 C2 C3 C C sing 1.51 N N
12 C11 C12 C C sing 1.39 N Y
13 C4 N2 C N sing 1.35 N N
14 C4 N1 C N sing 1.35 N N
15 C5 N2 C N sing 1.46 N N
16 C12 O4 C O sing 1.36 N N
17 N2 C24 N C sing 1.39 N N
18 C3 N1 C N sing 1.35 N N
19 C3 O1 C O doub 1.21 N N
20 N1 C29 N C sing 1.4 N N
21 O4 C13 O C sing 1.36 N N
22 C24 C29 C C doub 1.4 N Y
23 C24 C25 C C sing 1.39 N Y
24 C29 C28 C C sing 1.39 N Y
25 C14 C13 C C doub 1.38 N Y
26 C14 C15 C C sing 1.39 N Y
27 C13 C23 C C sing 1.41 N Y
28 C25 C26 C C doub 1.38 N Y
29 C15 C16 C C doub 1.36 N Y
30 C28 C27 C C doub 1.38 N Y
31 C23 C22 C C doub 1.41 N Y
32 C23 C17 C C sing 1.42 N Y
33 C26 C27 C C sing 1.38 N Y
34 C22 C21 C C sing 1.36 N Y
35 C16 C17 C C sing 1.41 N Y
36 C17 C18 C C doub 1.4 N Y
37 C21 C19 C C doub 1.41 N Y
38 C18 C19 C C sing 1.39 N Y
39 C19 C20 C C sing 1.43 N N
40 C20 N3 C N trip 1.14 N N
41 C10 H10 C H sing 1.08 N N
42 C1 H22 C H sing 1.09 N N
43 C1 H1 C H sing 1.09 N N
44 C2 H3 C H sing 1.09 N N
45 C5 H5 C H sing 1.09 N N
46 C5 H4 C H sing 1.09 N N
47 C6 H7 C H sing 1.09 N N
48 C6 H6 C H sing 1.09 N N
49 C8 H8 C H sing 1.08 N N
50 C9 H9 C H sing 1.08 N N
51 C11 H11 C H sing 1.08 N N
52 C14 H12 C H sing 1.08 N N
53 C15 H13 C H sing 1.08 N N
54 C16 H14 C H sing 1.08 N N
55 C18 H15 C H sing 1.08 N N
56 C21 H16 C H sing 1.08 N N
57 C22 H17 C H sing 1.08 N N
58 C25 H18 C H sing 1.08 N N
59 C26 H19 C H sing 1.08 N N
60 C27 H20 C H sing 1.08 N N
61 C28 H21 C H sing 1.08 N N
62 C1 H2 C H sing 1.09 N N
63 C2 H23 C H sing 1.09 N N