Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VT0    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAO PAL O P doub 1.48 N N
2 PAL OAP P O sing 1.61 N N
3 PAL OAN P O sing 1.61 N N
4 PAL CAK P C sing 1.82 N N
5 CAK PAM C P sing 1.82 N N
6 CAK NAJ C N sing 1.47 N N
7 PAM OAR P O doub 1.48 N N
8 PAM OAS P O sing 1.61 N N
9 PAM OAQ P O sing 1.61 N N
10 NAJ C4 N C sing 1.38 N N
11 C4 N3 C N doub 1.32 N Y
12 C4 C5 C C sing 1.42 N Y
13 N3 C2 N C sing 1.33 N Y
14 C5 CAC C C sing 1.45 N Y
15 C5 C6 C C doub 1.4 N Y
16 CAC CAD C C doub 1.32 N Y
17 CAD SAE C S sing 1.75 N Y
18 SAE C6 S C sing 1.76 N Y
19 C6 N1 C N sing 1.34 N Y
20 N1 C2 N C doub 1.32 N Y
21 C2 CAT C C sing 1.48 N N
22 CAT CAU C C doub 1.39 N Y
23 CAT CAY C C sing 1.39 N Y
24 CAU CAV C C sing 1.38 N Y
25 CAV CAW C C doub 1.38 N Y
26 CAW CAX C C sing 1.38 N Y
27 CAX CAY C C doub 1.38 N Y
28 OAP H1 O H sing 0.97 N N
29 OAN H2 O H sing 0.97 N N
30 CAK H3 C H sing 1.09 N N
31 OAS H4 O H sing 0.97 N N
32 OAQ H5 O H sing 0.97 N N
33 NAJ H6 N H sing 0.97 N N
34 CAC H8 C H sing 1.08 N N
35 CAD H9 C H sing 1.08 N N
36 CAU H12 C H sing 1.08 N N
37 CAV H13 C H sing 1.08 N N
38 CAW H14 C H sing 1.08 N N
39 CAX H15 C H sing 1.08 N N
40 CAY H16 C H sing 1.08 N N