Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : VZM    

Bonds between two atoms of the molecule

Total Number of Bonds: 29


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C O C O sing 1.43 N N
2 O C1 O C sing 1.36 N N
3 C1 C2 C C doub 1.39 N Y
4 C1 N2 C N sing 1.32 N Y
5 C2 C3 C C sing 1.38 N Y
6 N2 C10 N C doub 1.32 N Y
7 C3 C4 C C doub 1.39 N Y
8 C10 C4 C C sing 1.39 N Y
9 C4 N C N sing 1.4 N N
10 O1 C5 O C doub 1.22 N N
11 N C5 N C sing 1.35 N N
12 C5 N1 C N sing 1.35 N N
13 S C6 S C sing 1.76 N Y
14 S C9 S C sing 1.76 N Y
15 N1 C6 N C sing 1.4 N N
16 C6 C7 C C doub 1.34 N Y
17 C9 C8 C C doub 1.33 N Y
18 C7 C8 C C sing 1.39 N Y
19 N1 H1 N H sing 0.97 N N
20 C7 H2 C H sing 1.08 N N
21 C8 H3 C H sing 1.08 N N
22 C10 H4 C H sing 1.08 N N
23 C9 H5 C H sing 1.08 N N
24 N H6 N H sing 0.97 N N
25 C3 H7 C H sing 1.08 N N
26 C2 H8 C H sing 1.08 N N
27 C H9 C H sing 1.09 N N
28 C H10 C H sing 1.09 N N
29 C H11 C H sing 1.09 N N