Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : WA3    

Bonds between two atoms of the molecule

Total Number of Bonds: 154


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O9 C9 O C sing 1.43 N N
2 O10 C10 O C sing 1.43 N N
3 C9 C10 C C sing 1.53 N N
4 C9 C8 C C sing 1.53 N N
5 O8 C8 O C sing 1.43 N N
6 C10 C11 C C sing 1.53 N N
7 O6 C6 O C sing 1.43 N N
8 C8 C7 C C sing 1.53 N N
9 C11 O11 C O sing 1.43 N N
10 C11 C12 C C sing 1.53 N N
11 C6 C5 C C sing 1.53 N N
12 C7 O11 C O sing 1.43 N N
13 C7 S1 C S sing 1.81 N N
14 S2 C13 S C sing 1.81 N N
15 S2 C12 S C sing 1.81 N N
16 C13 C14 C C sing 1.51 N N
17 O5 C5 O C sing 1.43 N N
18 O5 C1 O C sing 1.43 N N
19 C5 C4 C C sing 1.53 N N
20 S1 C1 S C sing 1.81 N N
21 C1 C2 C C sing 1.53 N N
22 C14 C15 C C doub 1.35 N Y
23 C14 N3 C N sing 1.34 N Y
24 O4 C4 O C sing 1.43 N N
25 C15 N1 C N sing 1.35 N Y
26 C4 C3 C C sing 1.53 N N
27 C2 C3 C C sing 1.53 N N
28 C2 O2 C O sing 1.43 N N
29 N3 N2 N N doub 1.29 N Y
30 C3 O3 C O sing 1.43 N N
31 N1 N2 N N sing 1.29 N Y
32 N1 C16 N C sing 1.46 N N
33 O18 C18 O C sing 1.43 N N
34 C16 C17 C C sing 1.53 N N
35 C18 C17 C C sing 1.53 N N
36 C18 C19 C C sing 1.53 N N
37 O19 C19 O C sing 1.43 N N
38 C17 O17 C O sing 1.43 N N
39 C19 C20 C C sing 1.53 N N
40 O17 C21 O C sing 1.43 N N
41 C20 C21 C C sing 1.53 N N
42 C20 O20 C O sing 1.43 N N
43 C21 O21 C O sing 1.43 N N
44 O21 C22 O C sing 1.43 N N
45 C22 O26 C O sing 1.43 N N
46 C22 C23 C C sing 1.53 N N
47 O23 C23 O C sing 1.43 N N
48 C26 O26 C O sing 1.43 N N
49 C26 C27 C C sing 1.53 N N
50 C26 C25 C C sing 1.53 N N
51 C23 C24 C C sing 1.53 N N
52 C24 C25 C C sing 1.53 N N
53 C24 O24 C O sing 1.43 N N
54 C27 N4 C N sing 1.46 N N
55 O25 C25 O C sing 1.43 N N
56 N4 C28 N C sing 1.35 N Y
57 N4 N5 N N sing 1.29 N Y
58 C28 C29 C C doub 1.35 N Y
59 N5 N6 N N doub 1.29 N Y
60 C29 N6 C N sing 1.34 N Y
61 C29 C30 C C sing 1.51 N N
62 C30 S3 C S sing 1.81 N N
63 S3 C31 S C sing 1.81 N N
64 C31 C32 C C sing 1.53 N N
65 C32 C33 C C sing 1.53 N N
66 C32 O32 C O sing 1.43 N N
67 O33 C33 O C sing 1.43 N N
68 C33 C34 C C sing 1.53 N N
69 O32 C36 O C sing 1.43 N N
70 C36 S4 C S sing 1.81 N N
71 C36 C35 C C sing 1.53 N N
72 C34 O34 C O sing 1.43 N N
73 C34 C35 C C sing 1.53 N N
74 S4 C37 S C sing 1.81 N N
75 C35 O35 C O sing 1.43 N N
76 O38 C38 O C sing 1.43 N N
77 C37 C38 C C sing 1.53 N N
78 C37 O41 C O sing 1.43 N N
79 C38 C39 C C sing 1.53 N N
80 O41 C41 O C sing 1.43 N N
81 C39 O39 C O sing 1.43 N N
82 C39 C40 C C sing 1.53 N N
83 C41 C40 C C sing 1.53 N N
84 C41 C42 C C sing 1.53 N N
85 C40 O40 C O sing 1.43 N N
86 C42 O42 C O sing 1.43 N N
87 C1 HC1 C H sing 1.09 N N
88 C2 HC2 C H sing 1.09 N N
89 O2 HO2 O H sing 0.97 N N
90 C3 HC3 C H sing 1.09 N N
91 O3 HO3 O H sing 0.97 N N
92 C4 HC4 C H sing 1.09 N N
93 O4 HO4 O H sing 0.97 N N
94 C5 HC5 C H sing 1.09 N N
95 C6 HC6B C H sing 1.09 N N
96 C6 HC6A C H sing 1.09 N N
97 O6 HO6 O H sing 0.97 N N
98 C7 HC7 C H sing 1.09 N N
99 C8 HC8 C H sing 1.09 N N
100 O8 HO8 O H sing 0.97 N N
101 C9 HC9 C H sing 1.09 N N
102 O9 HO9 O H sing 0.97 N N
103 C10 HC10 C H sing 1.09 N N
104 O10 HO10 O H sing 0.97 N N
105 C11 HC11 C H sing 1.09 N N
106 C12 H12A C H sing 1.09 N N
107 C12 H12B C H sing 1.09 N N
108 C13 H13B C H sing 1.09 N N
109 C13 H13A C H sing 1.09 N N
110 C15 HC15 C H sing 1.08 N N
111 C16 H1 C H sing 1.09 N N
112 C16 H2 C H sing 1.09 N N
113 C17 HC17 C H sing 1.09 N N
114 C18 HC18 C H sing 1.09 N N
115 O18 HO18 O H sing 0.97 N N
116 C19 HC19 C H sing 1.09 N N
117 O19 HO19 O H sing 0.97 N N
118 C20 HC20 C H sing 1.09 N N
119 O20 HO20 O H sing 0.97 N N
120 C21 HC21 C H sing 1.09 N N
121 C22 HC22 C H sing 1.09 N N
122 C23 HC23 C H sing 1.09 N N
123 O23 HO23 O H sing 0.97 N N
124 C24 HC24 C H sing 1.09 N N
125 O24 HO24 O H sing 0.97 N N
126 C25 HC25 C H sing 1.09 N N
127 O25 HO25 O H sing 0.97 N N
128 C26 HC26 C H sing 1.09 N N
129 C27 H3 C H sing 1.09 N N
130 C27 H4 C H sing 1.09 N N
131 C28 HC28 C H sing 1.08 N N
132 C30 H30B C H sing 1.09 N N
133 C30 H30A C H sing 1.09 N N
134 C31 H31A C H sing 1.09 N N
135 C31 H31B C H sing 1.09 N N
136 C32 HC32 C H sing 1.09 N N
137 C33 HC33 C H sing 1.09 N N
138 O33 HO33 O H sing 0.97 N N
139 C34 HC34 C H sing 1.09 N N
140 O34 HO34 O H sing 0.97 N N
141 C35 HC35 C H sing 1.09 N N
142 O35 HO35 O H sing 0.97 N N
143 C36 HC36 C H sing 1.09 N N
144 C37 HC37 C H sing 1.09 N N
145 C38 HC38 C H sing 1.09 N N
146 O38 HO38 O H sing 0.97 N N
147 C39 HC39 C H sing 1.09 N N
148 O39 HO39 O H sing 0.97 N N
149 C40 HC40 C H sing 1.09 N N
150 O40 HO40 O H sing 0.97 N N
151 C41 HC41 C H sing 1.09 N N
152 C42 H42A C H sing 1.09 N N
153 C42 H42B C H sing 1.09 N N
154 O42 HO42 O H sing 0.97 N N