Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : X59    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C26 O25 C O sing 1.43 N N
2 C17 C18 C C doub 1.38 N Y
3 C17 C16 C C sing 1.38 N Y
4 C18 C19 C C sing 1.39 N Y
5 O25 C16 O C sing 1.36 N N
6 C16 C15 C C doub 1.39 N Y
7 C19 O20 C O sing 1.36 N N
8 C19 C24 C C doub 1.39 N Y
9 O20 C21 O C sing 1.43 N N
10 C15 C24 C C sing 1.39 N Y
11 C15 N14 C N sing 1.4 N N
12 C22 C21 C C sing 1.53 N N
13 C21 C23 C C sing 1.53 N N
14 N14 C13 N C sing 1.39 N N
15 C13 C12 C C doub 1.39 N Y
16 C13 N27 C N sing 1.33 N Y
17 C12 N11 C N sing 1.32 N Y
18 N27 C9 N C doub 1.33 N Y
19 N11 C10 N C doub 1.32 N Y
20 C9 C10 C C sing 1.39 N Y
21 C9 C8 C C sing 1.48 N N
22 C7 C8 C C doub 1.39 N Y
23 C7 C6 C C sing 1.38 N Y
24 C8 C5 C C sing 1.39 N Y
25 C6 C3 C C doub 1.4 N Y
26 C5 C4 C C doub 1.38 N Y
27 C3 C4 C C sing 1.4 N Y
28 C3 C2 C C sing 1.48 N N
29 O1 C2 O C doub 1.21 N N
30 C2 O28 C O sing 1.35 N N
31 C4 H1 C H sing 1.08 N N
32 C5 H2 C H sing 1.08 N N
33 C6 H3 C H sing 1.08 N N
34 C7 H4 C H sing 1.08 N N
35 C10 H5 C H sing 1.08 N N
36 C12 H6 C H sing 1.08 N N
37 N14 H7 N H sing 0.97 N N
38 C17 H8 C H sing 1.08 N N
39 C18 H9 C H sing 1.08 N N
40 C21 H10 C H sing 1.09 N N
41 C22 H11 C H sing 1.09 N N
42 C22 H12 C H sing 1.09 N N
43 C22 H13 C H sing 1.09 N N
44 C23 H14 C H sing 1.09 N N
45 C23 H15 C H sing 1.09 N N
46 C23 H16 C H sing 1.09 N N
47 C24 H17 C H sing 1.08 N N
48 C26 H18 C H sing 1.09 N N
49 C26 H19 C H sing 1.09 N N
50 C26 H20 C H sing 1.09 N N
51 O28 H21 O H sing 0.97 N N