Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : X5M    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C05 C04 C C sing N N
2 C01 C02 C C sing N N
3 C02 N03 C N sing N N
4 C04 N03 C N sing N N
5 N03 C06 N C sing N N
6 O13 N12 O N sing N N
7 C06 C07 C C doub N Y
8 C06 C11 C C sing N Y
9 C07 C08 C C sing N Y
10 N12 C11 N C sing N N
11 N12 O14 N O doub N N
12 C11 C10 C C doub N Y
13 C08 C09 C C doub N Y
14 C10 C09 C C sing N Y
15 C09 C15 C C sing N N
16 C22 C21 C C sing N N
17 C15 C21 C C sing N N
18 C15 N16 C N doub N N
19 C21 C20 C C sing N N
20 N16 N17 N N sing N N
21 C20 C18 C C sing N N
22 N17 C18 N C sing N N
23 C18 O19 C O doub N N
24 C01 H1 C H sing N N
25 C01 H2 C H sing N N
26 C01 H3 C H sing N N
27 C02 H4 C H sing N N
28 C02 H5 C H sing N N
29 C04 H6 C H sing N N
30 C04 H7 C H sing N N
31 C05 H8 C H sing N N
32 C05 H9 C H sing N N
33 C05 H10 C H sing N N
34 C07 H11 C H sing N N
35 C08 H12 C H sing N N
36 C10 H13 C H sing N N
37 C20 H15 C H sing N N
38 C20 H16 C H sing N N
39 C21 H17 C H sing N N
40 C22 H18 C H sing N N
41 C22 H19 C H sing N N
42 C22 H20 C H sing N N
43 N17 H14 N H sing N N