Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : XL5    

Bonds between two atoms of the molecule

Total Number of Bonds: 56


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C22 C21 C C sing 1.53 N N
2 C21 C20 C C sing 1.51 N N
3 O4 C20 O C doub 1.21 N N
4 C20 N4 C N sing 1.35 N N
5 CL1 C2 CL C sing 1.74 N N
6 C7 O1 C O sing 1.43 N N
7 N4 C15 N C sing 1.4 N N
8 O1 C1 O C sing 1.36 N N
9 C13 N2 C N doub 1.32 N Y
10 C13 C10 C C sing 1.39 N Y
11 C1 C2 C C doub 1.39 N Y
12 C1 C6 C C sing 1.39 N Y
13 C2 C3 C C sing 1.38 N Y
14 N2 C12 N C sing 1.32 N Y
15 O3 C10 O C sing 1.36 N N
16 O3 C9 O C sing 1.43 N N
17 C10 C11 C C doub 1.39 N Y
18 C15 C16 C C doub 1.39 N Y
19 C15 C14 C C sing 1.39 N Y
20 C12 N3 C N sing 1.39 N N
21 C12 N1 C N doub 1.32 N Y
22 N3 C14 N C sing 1.4 N N
23 C11 N1 C N sing 1.32 N Y
24 C6 C5 C C doub 1.39 N Y
25 C9 C3 C C sing 1.51 N N
26 C3 C4 C C doub 1.38 N Y
27 C16 C17 C C sing 1.38 N Y
28 C14 C19 C C doub 1.39 N Y
29 C5 C4 C C sing 1.39 N Y
30 C5 O2 C O sing 1.36 N N
31 C4 CL2 C CL sing 1.74 N N
32 C8 O2 C O sing 1.43 N N
33 C17 C18 C C doub 1.38 N Y
34 C19 C18 C C sing 1.38 N Y
35 C19 F1 C F sing 1.35 N N
36 C6 H1 C H sing 1.08 N N
37 C7 H2 C H sing 1.09 N N
38 C7 H3 C H sing 1.09 N N
39 C7 H4 C H sing 1.09 N N
40 C8 H5 C H sing 1.09 N N
41 C8 H6 C H sing 1.09 N N
42 C8 H7 C H sing 1.09 N N
43 C9 H8 C H sing 1.09 N N
44 C9 H9 C H sing 1.09 N N
45 C11 H10 C H sing 1.08 N N
46 C13 H11 C H sing 1.08 N N
47 N3 H12 N H sing 0.97 N N
48 C16 H13 C H sing 1.08 N N
49 C17 H14 C H sing 1.08 N N
50 C18 H15 C H sing 1.08 N N
51 N4 H16 N H sing 0.97 N N
52 C21 H17 C H sing 1.09 N N
53 C21 H18 C H sing 1.09 N N
54 C22 H19 C H sing 1.09 N N
55 C22 H20 C H sing 1.09 N N
56 C22 H21 C H sing 1.09 N N