Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : XOC    

Bonds between two atoms of the molecule

Total Number of Bonds: 48


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.39 N Y
2 C1 C6 C C doub 1.39 N Y
3 C1 S1 C S sing 1.76 N N
4 C2 C3 C C doub 1.38 N Y
5 C3 C4 C C sing 1.38 N Y
6 C4 C5 C C doub 1.38 N Y
7 C5 C6 C C sing 1.39 N Y
8 C6 N1 C N sing 1.39 N N
9 C7 C8 C C sing 1.39 N Y
10 C7 C12 C C doub 1.39 N Y
11 C7 N1 C N sing 1.39 N N
12 C8 C9 C C doub 1.38 N Y
13 C9 C10 C C sing 1.38 N Y
14 C10 C11 C C doub 1.38 N Y
15 C11 C12 C C sing 1.39 N Y
16 C12 S1 C S sing 1.76 N N
17 C13 C14 C C sing 1.51 N N
18 C13 N2 C N sing 1.35 N N
19 C13 O2 C O doub 1.21 N N
20 C14 N3 C N sing 1.47 N N
21 C15 C16 C C sing 1.53 N N
22 C15 N3 C N sing 1.47 N N
23 C16 C17 C C sing 1.53 N N
24 C17 C18 C C sing 1.53 N N
25 C18 C19 C C sing 1.53 N N
26 C19 N3 C N sing 1.47 N N
27 N1 N2 N N sing 1.4 N N
28 C2 H2 C H sing 1.08 N N
29 C3 H3 C H sing 1.08 N N
30 C4 H4 C H sing 1.08 N N
31 C5 H5 C H sing 1.08 N N
32 C8 H8 C H sing 1.08 N N
33 C9 H9 C H sing 1.08 N N
34 C10 H10 C H sing 1.08 N N
35 C11 H11 C H sing 1.08 N N
36 C14 H141 C H sing 1.09 N N
37 C14 H142 C H sing 1.09 N N
38 N2 HA N H sing 0.97 N N
39 C15 H151 C H sing 1.09 N N
40 C15 H152 C H sing 1.09 N N
41 C16 H161 C H sing 1.09 N N
42 C16 H162 C H sing 1.09 N N
43 C17 H171 C H sing 1.09 N N
44 C17 H172 C H sing 1.09 N N
45 C18 H181 C H sing 1.09 N N
46 C18 H182 C H sing 1.09 N N
47 C19 H191 C H sing 1.09 N N
48 C19 H192 C H sing 1.09 N N