Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : Y44    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C1 O C doub 1.22 N N
2 C1 N1 C N sing 1.35 N N
3 N1 C2 N C sing 1.46 N N
4 C2 C3 C C sing 1.51 N N
5 C3 C4 C C doub 1.39 N Y
6 C4 C5 C C sing 1.39 N Y
7 C5 C6 C C doub 1.38 N Y
8 C6 N2 C N sing 1.32 N Y
9 N2 C7 N C doub 1.32 N Y
10 C1 N3 C N sing 1.35 N N
11 N3 C8 N C sing 1.47 N N
12 C8 C9 C C sing 1.53 N N
13 C9 N4 C N sing 1.47 N N
14 N4 C10 N C sing 1.35 N N
15 C10 O2 C O doub 1.22 N N
16 C10 C11 C C sing 1.47 N N
17 C11 C12 C C doub 1.37 N Y
18 C12 C13 C C sing 1.37 N Y
19 C13 C14 C C doub 1.34 N Y
20 C14 S1 C S sing 1.71 N Y
21 N4 C15 N C sing 1.47 N N
22 C15 C16 C C sing 1.53 N N
23 C3 C7 C C sing 1.38 N Y
24 N3 C16 N C sing 1.47 N N
25 C11 S1 C S sing 1.76 N Y
26 N1 H1 N H sing 0.97 N N
27 C4 H4 C H sing 1.08 N N
28 C5 H5 C H sing 1.08 N N
29 C6 H6 C H sing 1.08 N N
30 C7 H7 C H sing 1.08 N N
31 C8 H9 C H sing 1.09 N N
32 C8 H8 C H sing 1.09 N N
33 C13 H13 C H sing 1.08 N N
34 C15 H16 C H sing 1.09 N N
35 C15 H15 C H sing 1.09 N N
36 C12 H12 C H sing 1.08 N N
37 C14 H14 C H sing 1.08 N N
38 C16 H18 C H sing 1.09 N N
39 C16 H17 C H sing 1.09 N N
40 C2 H2 C H sing 1.09 N N
41 C2 H3 C H sing 1.09 N N
42 C9 H11 C H sing 1.09 N N
43 C9 H10 C H sing 1.09 N N