Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : Y96    

Bonds between two atoms of the molecule

Total Number of Bonds: 47


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C10 C11 C C doub 1.36 N Y
2 C10 C9 C C sing 1.39 N Y
3 C11 C6 C C sing 1.41 N Y
4 C9 C8 C C doub 1.36 N Y
5 C6 C5 C C doub 1.41 N Y
6 C6 C7 C C sing 1.42 N Y
7 C8 C7 C C sing 1.41 N Y
8 C5 C4 C C sing 1.36 N Y
9 C7 C2 C C doub 1.41 N Y
10 O C O C doub 1.22 N N
11 O23 N22 O N sing 1.42 N N
12 C21 N22 C N doub 1.29 E N
13 C21 C15 C C sing 1.48 N N
14 C4 C3 C C doub 1.39 N Y
15 C14 C15 C C doub 1.39 N Y
16 C14 C13 C C sing 1.39 N Y
17 C15 C17 C C sing 1.4 N Y
18 C C13 C C sing 1.48 N N
19 C N C N sing 1.35 N N
20 C2 C3 C C sing 1.36 N Y
21 C2 C1 C C sing 1.51 N N
22 C13 C19 C C doub 1.4 N Y
23 C17 C18 C C doub 1.38 N Y
24 C19 C18 C C sing 1.38 N Y
25 C19 C20 C C sing 1.51 N N
26 N C1 N C sing 1.47 N N
27 C1 C12 C C sing 1.53 N N
28 C20 H1 C H sing 1.09 N N
29 C20 H2 C H sing 1.09 N N
30 C20 H3 C H sing 1.09 N N
31 C18 H4 C H sing 1.08 N N
32 C17 H5 C H sing 1.08 N N
33 C21 H6 C H sing 1.08 N N
34 O23 H7 O H sing 0.97 N N
35 C14 H8 C H sing 1.08 N N
36 N H9 N H sing 0.97 N N
37 C1 H10 C H sing 1.09 N N
38 C12 H11 C H sing 1.09 N N
39 C12 H12 C H sing 1.09 N N
40 C12 H13 C H sing 1.09 N N
41 C8 H14 C H sing 1.08 N N
42 C9 H15 C H sing 1.08 N N
43 C10 H16 C H sing 1.08 N N
44 C11 H17 C H sing 1.08 N N
45 C5 H18 C H sing 1.08 N N
46 C4 H19 C H sing 1.08 N N
47 C3 H20 C H sing 1.08 N N