Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : YK7    

Bonds between two atoms of the molecule

Total Number of Bonds: 57


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C31 O30 C O sing 1.43 N N
2 C28 C27 C C sing 1.53 N N
3 C28 C21 C C sing 1.51 N N
4 C20 C21 C C doub 1.39 N Y
5 C20 C19 C C sing 1.38 N Y
6 C27 N25 C N sing 1.47 N N
7 C21 C22 C C sing 1.38 N Y
8 O30 C19 O C sing 1.36 N N
9 C19 C18 C C doub 1.39 N Y
10 N25 C29 N C sing 1.47 N N
11 N25 C24 N C sing 1.47 N N
12 C22 C24 C C sing 1.51 N N
13 C22 C23 C C doub 1.39 N Y
14 C18 C23 C C sing 1.39 N Y
15 C18 N17 C N sing 1.4 N N
16 N17 C2 N C sing 1.38 N N
17 C2 N1 C N doub 1.33 N Y
18 C2 N3 C N sing 1.32 N Y
19 N1 C6 N C sing 1.32 N Y
20 N3 C4 N C doub 1.33 N Y
21 C13 C12 C C doub 1.38 N Y
22 C13 C14 C C sing 1.38 N Y
23 C12 C11 C C sing 1.39 N Y
24 C6 C5 C C doub 1.4 N Y
25 C14 C15 C C doub 1.38 N Y
26 C4 C5 C C sing 1.41 N Y
27 C4 N10 C N sing 1.38 N N
28 C11 N10 C N sing 1.4 N N
29 C11 C16 C C doub 1.39 N Y
30 C5 C7 C C sing 1.47 N N
31 C15 C16 C C sing 1.38 N Y
32 C7 N9 C N sing 1.35 N N
33 C7 O8 C O doub 1.22 N N
34 C6 H1 C H sing 1.08 N N
35 N10 H2 N H sing 0.97 N N
36 C12 H3 C H sing 1.08 N N
37 C15 H4 C H sing 1.08 N N
38 C16 H5 C H sing 1.08 N N
39 C23 H6 C H sing 1.08 N N
40 C24 H7 C H sing 1.09 N N
41 C24 H8 C H sing 1.09 N N
42 C27 H9 C H sing 1.09 N N
43 C27 H10 C H sing 1.09 N N
44 C31 H11 C H sing 1.09 N N
45 C31 H12 C H sing 1.09 N N
46 C31 H13 C H sing 1.09 N N
47 N9 H14 N H sing 0.97 N N
48 N9 H15 N H sing 0.97 N N
49 C13 H16 C H sing 1.08 N N
50 C14 H17 C H sing 1.08 N N
51 N17 H18 N H sing 0.97 N N
52 C20 H19 C H sing 1.08 N N
53 C28 H21 C H sing 1.09 N N
54 C28 H22 C H sing 1.09 N N
55 C29 H23 C H sing 1.09 N N
56 C29 H24 C H sing 1.09 N N
57 C29 H25 C H sing 1.09 N N