Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : ZMK    

Bonds between two atoms of the molecule

Total Number of Bonds: 67


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAJ PBG O P doub 1.48 N N
2 OAH PBG O P sing 1.61 N N
3 PBG OAY P O sing 1.61 N N
4 PBG OAK P O sing 1.61 N N
5 CAU OAY C O sing 1.43 N N
6 CAU CBF C C sing 1.53 N N
7 OAI CBE O C sing 1.43 N N
8 CBE CBF C C sing 1.53 N N
9 CBE CBD C C sing 1.51 N N
10 CAC CBF C C sing 1.53 N N
11 CBF CAB C C sing 1.53 N N
12 CBD NAW C N sing 1.35 N N
13 CBD OAG C O doub 1.21 N N
14 NAW CAP N C sing 1.47 N N
15 CAP CAS C C sing 1.53 N N
16 OAD CBA O C doub 1.21 N N
17 CAS CBA C C sing 1.51 N N
18 CBA NAV C N sing 1.35 N N
19 NAV CAO N C sing 1.47 N N
20 CAO CAQ C C sing 1.53 N N
21 CAQ SAZ C S sing 1.81 N N
22 SAZ CBC S C sing 1.71 N N
23 CAL CAN C C sing 1.53 N N
24 CAL CAM C C sing 1.53 N N
25 OAF CBC O C doub 1.21 N N
26 CAR CBB C C sing 1.51 N N
27 CAR CAM C C sing 1.53 N N
28 OAX CBB O C sing 1.34 N N
29 OAX CAA O C sing 1.45 N N
30 CBC CAT C C sing 1.51 N N
31 CAN CAT C C sing 1.53 N N
32 CBB OAE C O doub 1.21 N N
33 CAA H1 C H sing 1.09 N N
34 CAA H2 C H sing 1.09 N N
35 CAA H3 C H sing 1.09 N N
36 CAR H4 C H sing 1.09 N N
37 CAR H5 C H sing 1.09 N N
38 CAM H6 C H sing 1.09 N N
39 CAM H7 C H sing 1.09 N N
40 CAL H8 C H sing 1.09 N N
41 CAL H9 C H sing 1.09 N N
42 CAN H10 C H sing 1.09 N N
43 CAN H11 C H sing 1.09 N N
44 CAT H12 C H sing 1.09 N N
45 CAT H13 C H sing 1.09 N N
46 CAQ H14 C H sing 1.09 N N
47 CAQ H15 C H sing 1.09 N N
48 CAO H16 C H sing 1.09 N N
49 CAO H17 C H sing 1.09 N N
50 NAV H18 N H sing 0.97 N N
51 CAS H19 C H sing 1.09 N N
52 CAS H20 C H sing 1.09 N N
53 CAP H21 C H sing 1.09 N N
54 CAP H22 C H sing 1.09 N N
55 NAW H23 N H sing 0.97 N N
56 CBE H24 C H sing 1.09 N N
57 OAI H25 O H sing 0.97 N N
58 CAC H26 C H sing 1.09 N N
59 CAC H27 C H sing 1.09 N N
60 CAC H28 C H sing 1.09 N N
61 CAB H29 C H sing 1.09 N N
62 CAB H30 C H sing 1.09 N N
63 CAB H31 C H sing 1.09 N N
64 CAU H32 C H sing 1.09 N N
65 CAU H33 C H sing 1.09 N N
66 OAK H34 O H sing 0.97 N N
67 OAH H35 O H sing 0.97 N N