Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ZPD    

Bonds between two atoms of the molecule

Total Number of Bonds: 127


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C34 C33 C C sing 1.53 N N
2 C34 C37 C C sing 1.53 N N
3 C33 C24 C C sing 1.53 N N
4 C38 C37 C C sing 1.53 N N
5 C38 C39 C C sing 1.53 N N
6 C24 C20 C C sing 1.53 N N
7 C20 C15 C C sing 1.53 N N
8 C15 C25 C C sing 1.53 N N
9 C15 C14 C C sing 1.53 N N
10 C14 C13 C C sing 1.53 N N
11 C13 C11 C C sing 1.53 N N
12 C11 C3 C C sing 1.53 N N
13 C22 C6 C C sing 1.53 N N
14 C19 C2 C C sing 1.53 N N
15 C2 C5 C C sing 1.53 N N
16 C2 C4 C C sing 1.53 N N
17 C9 C5 C C sing 1.53 N N
18 C9 C10 C C sing 1.53 N N
19 C3 C21 C C sing 1.53 N N
20 C3 C7 C C sing 1.53 N N
21 C8 C4 C C sing 1.53 N N
22 C8 C7 C C sing 1.53 N N
23 C6 C10 C C sing 1.53 N N
24 C6 C12 C C sing 1.53 N N
25 C12 C16 C C sing 1.53 N N
26 C16 C17 C C sing 1.53 N N
27 C30 C18 C C sing 1.53 N N
28 C18 C17 C C sing 1.53 N N
29 C18 C23 C C sing 1.53 N N
30 C23 C32 C C sing 1.53 N N
31 C32 C35 C C sing 1.53 N N
32 C35 O5 C O sing 1.43 N N
33 O5 P1 O P sing 1.61 N N
34 P1 O1 P O sing 1.61 N N
35 P1 O8 P O doub 1.48 N N
36 P1 O7 P O sing 1.61 N N
37 O1 C31 O C sing 1.43 N N
38 O4 C28 O C sing 1.43 N N
39 C31 C28 C C sing 1.53 N N
40 C31 C1 C C sing 1.53 N N
41 C28 C26 C C sing 1.53 N N
42 C1 C29 C C sing 1.53 N N
43 C26 O2 C O sing 1.43 N N
44 C26 C27 C C sing 1.53 N N
45 C29 C27 C C sing 1.53 N N
46 C29 C36 C C sing 1.53 N N
47 C27 O3 C O sing 1.43 N N
48 O6 C36 O C sing 1.43 N N
49 C1 H1 C H sing 1.09 N N
50 C1 H2 C H sing 1.09 N N
51 C2 H3 C H sing 1.09 N N
52 C3 H4 C H sing 1.09 N N
53 C4 H5 C H sing 1.09 N N
54 C4 H6 C H sing 1.09 N N
55 C6 H7 C H sing 1.09 N N
56 C12 H8 C H sing 1.09 N N
57 C12 H9 C H sing 1.09 N N
58 C13 H10 C H sing 1.09 N N
59 C13 H11 C H sing 1.09 N N
60 C14 H12 C H sing 1.09 N N
61 C14 H13 C H sing 1.09 N N
62 C15 H14 C H sing 1.09 N N
63 C16 H15 C H sing 1.09 N N
64 C16 H16 C H sing 1.09 N N
65 C17 H17 C H sing 1.09 N N
66 C17 H18 C H sing 1.09 N N
67 C18 H19 C H sing 1.09 N N
68 C10 H20 C H sing 1.09 N N
69 C10 H21 C H sing 1.09 N N
70 C11 H22 C H sing 1.09 N N
71 C11 H23 C H sing 1.09 N N
72 C19 H24 C H sing 1.09 N N
73 C19 H25 C H sing 1.09 N N
74 C19 H26 C H sing 1.09 N N
75 C20 H27 C H sing 1.09 N N
76 C20 H28 C H sing 1.09 N N
77 C21 H29 C H sing 1.09 N N
78 C21 H30 C H sing 1.09 N N
79 C21 H31 C H sing 1.09 N N
80 C22 H32 C H sing 1.09 N N
81 C22 H33 C H sing 1.09 N N
82 C22 H34 C H sing 1.09 N N
83 C23 H35 C H sing 1.09 N N
84 C23 H36 C H sing 1.09 N N
85 C24 H37 C H sing 1.09 N N
86 C24 H38 C H sing 1.09 N N
87 C25 H39 C H sing 1.09 N N
88 C25 H40 C H sing 1.09 N N
89 C25 H41 C H sing 1.09 N N
90 C26 H42 C H sing 1.09 N N
91 C27 H43 C H sing 1.09 N N
92 C28 H44 C H sing 1.09 N N
93 C29 H45 C H sing 1.09 N N
94 C30 H46 C H sing 1.09 N N
95 C30 H47 C H sing 1.09 N N
96 C30 H48 C H sing 1.09 N N
97 C31 H49 C H sing 1.09 N N
98 C32 H50 C H sing 1.09 N N
99 C32 H51 C H sing 1.09 N N
100 C33 H52 C H sing 1.09 N N
101 C33 H53 C H sing 1.09 N N
102 C34 H54 C H sing 1.09 N N
103 C34 H55 C H sing 1.09 N N
104 C35 H56 C H sing 1.09 N N
105 C35 H57 C H sing 1.09 N N
106 C36 H58 C H sing 1.09 N N
107 C36 H59 C H sing 1.09 N N
108 C37 H60 C H sing 1.09 N N
109 C37 H61 C H sing 1.09 N N
110 C38 H62 C H sing 1.09 N N
111 C38 H63 C H sing 1.09 N N
112 C39 H64 C H sing 1.09 N N
113 C39 H65 C H sing 1.09 N N
114 C39 H66 C H sing 1.09 N N
115 C5 H67 C H sing 1.09 N N
116 C5 H68 C H sing 1.09 N N
117 C7 H69 C H sing 1.09 N N
118 C7 H70 C H sing 1.09 N N
119 C8 H71 C H sing 1.09 N N
120 C8 H72 C H sing 1.09 N N
121 C9 H73 C H sing 1.09 N N
122 C9 H74 C H sing 1.09 N N
123 O2 H75 O H sing 0.97 N N
124 O3 H76 O H sing 0.97 N N
125 O4 H77 O H sing 0.97 N N
126 O6 H78 O H sing 0.97 N N
127 O7 H79 O H sing 0.97 N N