Chemical Components in the PDB

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MH6 : Summary

Code

MH6

One-letter code

S

Molecule name

3-hydroxy-2-iminopropanoic acid

Systematic names

ProgramVersionName
ACDLabs 12.01 (2E)-3-hydroxy-2-iminopropanoic acid
OpenEye OEToolkits 1.7.0 3-hydroxy-2-imino-propanoic acid

Formula

C3 H5 N O3

Formal charge

0

Molecular weight

103.077 Da

SMILES

TypeProgramVersionDescriptor
SMILES ACDLabs 12.01 O=C(O)C(=[N@H])CO
SMILES CACTVS 3.370 OCC(=N)C(O)=O
SMILES OpenEye OEToolkits 1.7.0 C(C(=N)C(=O)O)O
Canonical SMILES CACTVS 3.370 OCC(=N)C(O)=O
Canonical SMILES OpenEye OEToolkits 1.7.0 [H]/N=C(\CO)/C(=O)O

IUPAC InChI

InChI=1S/C3H5NO3/c4-2(1-5)3(6)7/h4-5H,1H2,(H,6,7)/b4-2+

IUPAC InChI key

MUHXUPVPXJXCGV-DUXPYHPUSA-N
MH6

wwPDB Information

Atom count

12 (7 without Hydrogen)

Polymer type

Amino Acid

Type description

PEPTIDE LINKING

Type code

ATOMP

Is modified

Yes

Standard parent

SER

Defined at

2008-03-11

Last modified at

2023-11-03

Status

Released

Obsoleted

Not Assigned



MH6 : Atoms of Molecule

Total Number of Atoms: 12
Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 0.513 1.51 0.0
2 CA C CA N N N 0 0.233 0.26 0.0
3 C C C N N N 0 -1.181 -0.183 0.0
4 CB C CB N N N 0 1.343 -0.76 0.0
5 OG O OG N N Y 0 2.605 -0.091 0.0
6 O O O N N Y 0 -1.446 -1.368 0.0
7 OXT O OXT N N Y 0 -2.172 0.729 0.0
8 H H HN N N Y 0 1.438 1.8 0.0
9 HB2 H HB2 N N N 0 1.262 -1.384 0.89
10 HB3 H HB3 N N N 0 1.262 -1.384 -0.89
11 HXT H HXT N N Y 0 -3.079 0.391 0.0
12 HG H HG N N Y 0 3.366 -0.687 0.0



MH6 : Chemical Bonds

Total Number of Bonds: 11
Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C doub 1.28 N N
2 CA C C C sing 1.48 N N
3 CA CB C C sing 1.51 N N
4 C O C O doub 1.21 N N
5 C OXT C O sing 1.35 N N
6 CB OG C O sing 1.43 N N
7 N H N H sing 0.97 N N
8 CB HB2 C H sing 1.09 N N
9 CB HB3 C H sing 1.09 N N
10 OXT HXT O H sing 0.97 N N
11 OG HG O H sing 0.97 N N



MH6 : Used in PDB Entries

Total Number of PDB Entries: 21
Ligand Code PDB Entry ID Type Total Distinct
MH6 1d8t Open in New Window Polymer component 2 1
MH6 1e9w Open in New Window Polymer component 1 1
MH6 1oln Open in New Window Polymer component 1 1
MH6 2c77 Open in New Window Polymer component 1 1
MH6 2e49 Open in New Window Bound ligand 4 1
MH6 2jq7 Open in New Window Polymer component 1 1
MH6 2l2w Open in New Window Polymer component 1 1
MH6 2l2x Open in New Window Polymer component 1 1
MH6 2l2y Open in New Window Polymer component 1 1
MH6 2mc0 Open in New Window Polymer component 1 1
MH6 2zjp Open in New Window Polymer component 1 1
MH6 3cep Open in New Window Bound ligand 1 1
MH6 3cf5 Open in New Window Polymer component 1 1
MH6 3u2q Open in New Window Polymer component 1 1
MH6 3u6b Open in New Window Polymer component 2 1
MH6 3u6k Open in New Window Polymer component 2 1
MH6 4g5g Open in New Window Polymer component 1 1
MH6 4hp2 Open in New Window Polymer component 2 1
MH6 5d8h Open in New Window Polymer component 1 1
MH6 5jbq Open in New Window Polymer component 1 1
MH6 6mxf Open in New Window Polymer component 1 1