Chemical Components in the PDB

pdbe.org/chem
spacer

53L : Summary

Code

53L

One-letter code

X

Molecule name

(2R,4S,4aS,5S)-6'-hydroxy-2,4-dimethyl-8-nitro-1,2,4,4a-tetrahydro-2'H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5'-pyrimidine]-2',4'(3'H)-dione

Systematic names

ProgramVersionName
ACDLabs 12.01 (2R,4S,4aS,5S)-6'-hydroxy-2,4-dimethyl-8-nitro-1,2,4,4a-tetrahydro-2'H,6H-spiro[1,4-oxazino[4,3-a]quinoline-5,5'-pyrimidine]-2',4'(3'H)-dione
OpenEye OEToolkits 1.9.2 (2R,4S,4aS,5S)-2,4-dimethyl-8-nitro-6'-oxidanyl-spiro[2,4,4a,6-tetrahydro-1H-[1,4]oxazino[4,3-a]quinoline-5,5'-pyrimidine]-2',4'-dione

Formula

C17 H18 N4 O6

Formal charge

0

Molecular weight

374.348 Da

SMILES

TypeProgramVersionDescriptor
SMILES ACDLabs 12.01 C13C(OC(CN1c2ccc(N(=O)=O)cc2CC34C(O)=NC(NC4=O)=O)C)C
SMILES CACTVS 3.385 C[CH]1CN2[CH]([CH](C)O1)[C]3(Cc4cc(ccc24)[N](=O)=O)C(=O)NC(=O)N=C3O
SMILES OpenEye OEToolkits 1.9.2 CC1CN2c3ccc(cc3CC4(C2C(O1)C)C(=O)NC(=O)N=C4O)N(=O)=O
Canonical SMILES CACTVS 3.385 C[C@@H]1CN2[C@H]([C@H](C)O1)[C@]3(Cc4cc(ccc24)[N](=O)=O)C(=O)NC(=O)N=C3O
Canonical SMILES OpenEye OEToolkits 1.9.2 C[C@@H]1CN2c3ccc(cc3C[C@@]4([C@H]2[C@@H](O1)C)C(=O)NC(=O)N=C4O)N(=O)=O

IUPAC InChI

InChI=1S/C17H18N4O6/c1-8-7-20-12-4-3-11(21(25)26)5-10(12)6-17(13(20)9(2)27-8)14(22)18-16(24)19-15(17)23/h3-5,8-9,13H,6-7H2,1-2H3,(H2,18,19,22,23,24)/t8-,9+,13-/m1/s1

IUPAC InChI key

DJZPHYIXNUOVJU-VYUIOLGVSA-N
53L

wwPDB Information

Atom count

45 (27 without Hydrogen)

Polymer type

Bound ligand

Type description

NON-POLYMER

Type code

HETAIN

Is modified

No

Standard parent

Not Assigned

Defined at

2015-07-22

Last modified at

2015-12-11

Status

Released

Obsoleted

Not Assigned