Chemical Components in the PDB

pdbe.org/chem
spacer

AM9 : Summary

Code

AM9

One-letter code

X

Molecule name

6-(2,6-dimethylphenyl)-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimido[5',4':5,6]pyrimido[1,2-a]benzimidazol-5(6H)-one

Systematic names

ProgramVersionName
ACDLabs 10.04 6-(2,6-dimethylphenyl)-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimido[5',4':5,6]pyrimido[1,2-a]benzimidazol-5(6H)-one

Formula

C31 H30 N8 O

Formal charge

0

Molecular weight

530.623 Da

SMILES

TypeProgramVersionDescriptor
SMILES ACDLabs 10.04 O=C3N(c1c(cccc1C)C)c6nc7ccccc7n6c2nc(ncc23)Nc4ccc(cc4)N5CCN(C)CC5
SMILES CACTVS 3.341 CN1CCN(CC1)c2ccc(Nc3ncc4C(=O)N(c5nc6ccccc6n5c4n3)c7c(C)cccc7C)cc2
SMILES OpenEye OEToolkits 1.5.0 Cc1cccc(c1N2c3nc4ccccc4n3-c5c(cnc(n5)Nc6ccc(cc6)N7CCN(CC7)C)C2=O)C
Canonical SMILES CACTVS 3.341 CN1CCN(CC1)c2ccc(Nc3ncc4C(=O)N(c5nc6ccccc6n5c4n3)c7c(C)cccc7C)cc2
Canonical SMILES OpenEye OEToolkits 1.5.0 Cc1cccc(c1N2c3nc4ccccc4n3-c5c(cnc(n5)Nc6ccc(cc6)N7CCN(CC7)C)C2=O)C

IUPAC InChI

InChI=1S/C31H30N8O/c1-20-7-6-8-21(2)27(20)39-29(40)24-19-32-30(35-28(24)38-26-10-5-4-9-25(26)34-31(38)39)33-22-11-13-23(14-12-22)37-17-15-36(3)16-18-37/h4-14,19H,15-18H2,1-3H3,(H,32,33,35)

IUPAC InChI key

BHJJWVDKNXABFS-UHFFFAOYSA-N
AM9

wwPDB Information

Atom count

70 (40 without Hydrogen)

Polymer type

Bound ligand

Type description

NON-POLYMER

Type code

HETAIN

Is modified

No

Standard parent

Not Assigned

Defined at

2008-01-21

Last modified at

2011-06-04

Status

Released

Obsoleted

Not Assigned