1jgq

X-ray diffraction
5Å resolution

The Path of Messenger RNA Through the Ribosome. THIS FILE, 1JGQ, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY

Released:
Model geometry
Fit model/data
Data not deposited
Source organism: Thermus thermophilus
Primary publication:
The path of messenger RNA through the ribosome.
Cell 106 233-41 (2001)
PMID: 11511350

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 25-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-250088 (preferred)
Entry contents:
20 distinct polypeptide molecules
4 distinct RNA molecules
Macromolecules (24 distinct):
Small ribosomal subunit protein uS2 Chain: E
Molecule details ›
Chain: E
Length: 256 amino acids
Theoretical weight: 29.32 KDa
Source organism: Thermus thermophilus
UniProt:
  • Canonical: P80371 (Residues: 1-256; Coverage: 100%)
Gene names: TTHA0861, rps2, rpsB
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein uS3 Chain: F
Molecule details ›
Chain: F
Length: 239 amino acids
Theoretical weight: 26.75 KDa
Source organism: Thermus thermophilus
UniProt:
  • Canonical: P80372 (Residues: 1-239; Coverage: 100%)
Gene names: TTHA1686, rps3, rpsC
Sequence domains:
Small ribosomal subunit protein uS4 Chain: G
Small ribosomal subunit protein uS5 Chain: H
Small ribosomal subunit protein bS6 Chain: I
Small ribosomal subunit protein uS7 Chain: J
Small ribosomal subunit protein uS8 Chain: K
Small ribosomal subunit protein uS9 Chain: L
Small ribosomal subunit protein uS10 Chain: M
Small ribosomal subunit protein uS11 Chain: N
Small ribosomal subunit protein uS12 Chain: O
Small ribosomal subunit protein uS13 Chain: P
Small ribosomal subunit protein uS14 Chain: Q
Small ribosomal subunit protein uS15 Chain: R
Small ribosomal subunit protein bS16 Chain: S
Small ribosomal subunit protein uS17 Chain: T
Small ribosomal subunit protein bS18 Chain: U
Small ribosomal subunit protein uS19 Chain: V
Small ribosomal subunit protein bS20 Chain: W
Small ribosomal subunit protein bTHX Chain: X
16S ribosomal RNA Chain: A
tRNA(Phe) Chains: B, C
tRNA(Phe) Chain: D
MESSENGER RNA MF36 Chain: 1

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.2
Spacegroup: I422
Unit cell:
a: 507.2Å b: 507.2Å c: 803.66Å
α: 90° β: 90° γ: 90°