3j16

Electron Microscopy
7.2Å resolution

Models of ribosome-bound Dom34p and Rli1p and their ribosomal binding partners

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dodecamer (preferred)
PDBe Complex ID:
PDB-CPX-138627 (preferred)
Entry contents:
9 distinct polypeptide molecules
3 distinct RNA molecules
Macromolecules (12 distinct):
Protein DOM34 Chain: A
Molecule details ›
Chain: A
Length: 386 amino acids
Theoretical weight: 44.12 KDa
Source organism: Saccharomyces cerevisiae
UniProt:
  • Canonical: P33309 (Residues: 1-386; Coverage: 100%)
Gene names: DOM34, N2016, YNL001W
Sequence domains:
Translation initiation factor RLI1 Chain: B
Molecule details ›
Chain: B
Length: 608 amino acids
Theoretical weight: 68.43 KDa
Source organism: Saccharomyces cerevisiae
UniProt:
  • Canonical: Q03195 (Residues: 1-608; Coverage: 100%)
Gene names: RLI1, YDR091C
Sequence domains:
Large ribosomal subunit protein uL6A Chain: F
Small ribosomal subunit protein eS30A Chain: E
Large ribosomal subunit protein uL10 Chain: G
Small ribosomal subunit protein eS6A Chain: C
Large ribosomal subunit protein uL11A Chain: H
Large ribosomal subunit protein uL14A Chain: I
Small ribosomal subunit protein eS24A Chain: D
28S ribosomal RNA Chain: J
18S Ribosomal RNA Chain: K
P-site tRNA Chain: L

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 7.2Å
Relevant EMDB volumes: EMD-2010