6jzn

X-ray diffraction
2.89Å resolution

Structure of the intermembrane space region of PARC6-PDV1

Released:
Model geometry
Fit model/data
Source organism: Arabidopsis thaliana
Entry authors: Feng Y, Liu Z

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-186638 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Plastid division protein CDP1, chloroplastic Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 149 amino acids
Theoretical weight: 17.3 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8VY16 (Residues: 685-819; Coverage: 17%)
Gene names: ARC6H, At3g19180, CDP1, MVI11.9, PARC6, SUBA2
Sequence domains: ARC6-like, IMS domain
Plastid division protein PDV1 Chains: E, F, G, H
Molecule details ›
Chains: E, F, G, H
Length: 10 amino acids
Theoretical weight: 1.15 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9FK13 (Residues: 263-272; Coverage: 4%)
Gene names: At5g53280, K19E1.8, PDV1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U1
Spacegroup: C2221
Unit cell:
a: 91.454Å b: 95.827Å c: 196.566Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.225 0.223 0.272
Expression system: Escherichia coli